Difference between revisions of "RXN-12196"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPERMIDINESYN-RXN SPERMIDINESYN-RXN] == * direction: ** REVERSIBLE * common name: ** spermidine syn...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12196 RXN-12196] == * direction: ** REVERSIBLE * common name: ** nucleoside-triphosphatase * ec...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPERMIDINESYN-RXN SPERMIDINESYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12196 RXN-12196] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** spermidine synthase
+
** nucleoside-triphosphatase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.16 EC-2.5.1.16]
+
** [http://enzyme.expasy.org/EC/3.6.1.15 EC-3.6.1.15]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PUTRESCINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''<=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[SPERMIDINE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[UTP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 putrescine[c] '''+''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''<=>''' 1 S-methyl-5'-thioadenosine[c] '''+''' 1 spermidine[c] '''+''' 1 H+[c]
+
** 1 UTP[c] '''+''' 1 H2O[c] '''<=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-04_002790]]
+
* Gene: [[Ec-06_005470]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
* [[Ec-17_001590]]
+
* Gene: [[Ec-18_004660]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
−
** [[pantograph]]-[[aragem]]
+
* Gene: [[Ec-02_005730]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-01_003690]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-17_000870]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-05_005340]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-28_000420]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-03_004860]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-03_001180]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12721 12721]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01920 R01920]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00159 R00159]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P19623 P19623]
+
−
** [http://www.uniprot.org/uniprot/Q57761 Q57761]
+
−
** [http://www.uniprot.org/uniprot/Q12074 Q12074]
+
−
** [http://www.uniprot.org/uniprot/Q12455 Q12455]
+
−
** [http://www.uniprot.org/uniprot/P09158 P09158]
+
−
** [http://www.uniprot.org/uniprot/O48660 O48660]
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=spermidine synthase}}
+
{{#set: common name=nucleoside-triphosphatase}}
−
{{#set: ec number=EC-2.5.1.16}}
+
{{#set: ec number=EC-3.6.1.15}}
−
{{#set: gene associated=Ec-04_002790|Ec-17_001590}}
+
{{#set: gene associated=Ec-06_005470|Ec-18_004660|Ec-02_005730|Ec-01_003690|Ec-17_000870|Ec-05_005340|Ec-28_000420|Ec-03_004860|Ec-03_001180}}
−
{{#set: in pathway=BSUBPOLYAMSYN-PWY}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 20:50, 21 March 2018

Reaction RXN-12196

  • direction:
    • REVERSIBLE
  • common name:
    • nucleoside-triphosphatase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UTP[c] + 1 H2O[c] <=> 1 UDP[c] + 1 H+[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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