Difference between revisions of "Ec-05 002680"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14481 RXN-14481] == * direction: ** LEFT-TO-RIGHT * common name: ** tRNA-i(6)A37 thiotransferas...")
 
(Created page with "Category:Gene == Gene Ec-05_002680 == * left end position: ** 4342061 * transcription direction: ** NEGATIVE * right end position: ** 4351077 * centisome position: ** 47.6...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14481 RXN-14481] ==
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== Gene Ec-05_002680 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4342061
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* common name:
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* transcription direction:
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** tRNA-i(6)A37 thiotransferase enzyme MiaB
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** NEGATIVE
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* right end position:
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** 4351077
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* centisome position:
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** 47.69659   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0004_0179
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** Esi0004_0179
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** TPS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN1G-1435]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-15360]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-11592]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 2-thio-N6-dimethylallyladenosine37 in tRNA[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 2-methylthio-N6-dimethylallyladenosine37 in tRNA[c]
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* Reaction: [[RXN1G-1436]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN1G-1437]]
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* [[Ec-02_004930]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN1G-1438]]
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== Pathways ==
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** Source: [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* [[annotation]]:
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* Reaction: [[RXN1G-1439]]
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** [[pathwaytools]]:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[TREHALOSE6PSYN-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[TREHALOSEPHOSPHA-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWYG-321]]
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* [[TREHALOSESYN-PWY]]
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* [[TRESYN-PWY]]
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* [[PWY-881]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4342061}}
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{{#set: common name=tRNA-i(6)A37 thiotransferase enzyme MiaB}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: gene associated=Ec-02_004930}}
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{{#set: right end position=4351077}}
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{{#set: in pathway=}}
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{{#set: centisome position=47.69659    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=Esi_0004_0179|Esi0004_0179|TPS}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction associated=RXN1G-1435|RXN1G-1436|RXN1G-1437|RXN1G-1438|RXN1G-1439|TREHALOSE6PSYN-RXN|TREHALOSEPHOSPHA-RXN}}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: pathway associated=PWYG-321|TREHALOSESYN-PWY|TRESYN-PWY|PWY-881}}

Latest revision as of 20:50, 21 March 2018

Gene Ec-05_002680

  • left end position:
    • 4342061
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4351077
  • centisome position:
    • 47.69659
  • Synonym(s):
    • Esi_0004_0179
    • Esi0004_0179
    • TPS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-05_002680&oldid=29654"