Difference between revisions of "Ec-01 002250"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] == * direction: ** LEFT-TO-RIGHT * common name: ** Methylmalonate Semialdehyde...")
 
(Created page with "Category:Gene == Gene Ec-01_002250 == * left end position: ** 1865477 * transcription direction: ** POSITIVE * right end position: ** 1867893 * centisome position: ** 18.0...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11213 RXN-11213] ==
+
== Gene Ec-01_002250 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 1865477
−
* common name:
+
* transcription direction:
−
** Methylmalonate Semialdehyde Dehydrogenase
+
** POSITIVE
−
** Methylmalonate-semialdehyde dehydrogenase
+
* right end position:
−
* ec number:
+
** 1867893
−
** [http://enzyme.expasy.org/EC/1.2.1.27 EC-1.2.1.27]
+
* centisome position:
 +
** 18.078371   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0003_0046
 +
** Esi0003_0046
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[2.7.8.23-RXN]]
−
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROPIONYL-COA]][c] '''+''' 1 [[HCO3]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 coenzyme A[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 propanoyl-CoA[c] '''+''' 1 hydrogen carbonate[c]
+
* Reaction: [[RXN-10827]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-10828]]
−
* [[Ec-06_003440]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: automated-name-match
−
***EC-NUMBER
+
== Pathways associated ==
−
* [[Ec-10_003810]]
+
* [[PWY-6322]]
−
** ESILICULOSUS_GENOME
+
* [[PWY-7769]]
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
+
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=1865477}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20804 20804]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=1867893}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00935 R00935]
+
{{#set: centisome position=18.078371    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=Esi_0003_0046|Esi0003_0046}}
−
{{#set: common name=Methylmalonate Semialdehyde Dehydrogenase}}
+
{{#set: reaction associated=2.7.8.23-RXN|RXN-10827|RXN-10828}}
−
{{#set: common name=Methylmalonate-semialdehyde dehydrogenase}}
+
{{#set: pathway associated=PWY-6322|PWY-7769}}
−
{{#set: ec number=EC-1.2.1.27}}
+
−
{{#set: gene associated=Ec-06_003440|Ec-10_003810}}
+
−
{{#set: in pathway=VALDEG-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:50, 21 March 2018

Gene Ec-01_002250

  • left end position:
    • 1865477
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1867893
  • centisome position:
    • 18.078371
  • Synonym(s):
    • Esi_0003_0046
    • Esi0003_0046

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_002250&oldid=29677"