Difference between revisions of "Pi"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] == * direction: ** REVERSIBLE * common name: ** aminomethyltransferase ** Aminom...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Pi Pi] == * smiles: ** [O-]P(=O)(O)[O-] * inchi key: ** InChIKey=NBIIXXVUZAFLBC-UHFFFAOYSA-L *...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Pi Pi] ==
−
* direction:
+
* smiles:
−
** REVERSIBLE
+
** [O-]P(=O)(O)[O-]
 +
* inchi key:
 +
** InChIKey=NBIIXXVUZAFLBC-UHFFFAOYSA-L
 
* common name:
 
* common name:
−
** aminomethyltransferase
+
** phosphate
−
** Aminomethyltransferase
+
* molecular weight:
−
* ec number:
+
** 95.979   
−
** [http://enzyme.expasy.org/EC/2.1.2.10 EC-2.1.2.10]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** inorganic phosphate
 +
** phosphate-inorganic
 +
** Pi
 +
** orthophosphate
 +
** PO43-
 +
** HPO42-
 +
** HPO4-2
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN]]
−
** 1 [[THF-GLU-N]][c] '''+''' 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[DIHYDROLIPOYL-GCVH]][c]
+
* [[RXNQT-4141]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 a tetrahydrofolate[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine[c] '''<=>''' 1 ammonium[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine[c]
+
* [[DETHIOBIOTIN-SYN-RXN]]
−
 
+
* [[HISTIDPHOS-RXN]]
−
== Genes associated with this reaction  ==
+
* [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-10953]]
−
* [[Ec-20_004610]]
+
* [[6.3.5.7-RXN]]
−
** ESILICULOSUS_GENOME
+
* [[3.6.3.1-RXN]]
−
***GO-TERM
+
* [[RXN-10955]]
−
* [[Ec-24_001010]]
+
* [[RXN-10954]]
−
** ESILICULOSUS_GENOME
+
* [[RXN-11109]]
−
***GO-TERM
+
* [[HISTIDPHOS-RXN[CCO-CYTOSOL]-L-HISTIDINOL-P/WATER//HISTIDINOL/Pi.49.]]
−
* [[Ec-00_002470]]
+
* [[RXN-10952]]
−
** ESILICULOSUS_GENOME
+
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
−
***GO-TERM
+
* [[PGPPHOSPHA-RXN]]
−
* [[Ec-07_004110]]
+
* [[RXN0-5462]]
−
** ESILICULOSUS_GENOME
+
* [[RXN3DJ-25]]
−
***EC-NUMBER
+
* [[RXN-14219]]
−
== Pathways  ==
+
* [[RXN-14216]]
−
* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
+
* [[RXN-14217]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[RXN-14214]]
−
== Reconstruction information  ==
+
* [[F16BDEPHOS-RXN]]
−
* [[annotation]]:
+
* [[RXN-10034]]
−
** [[pathwaytools]]:
+
* [[DIHYDROFOLATESYNTH-RXN]]
−
*** [[esiliculosus_genome]]
+
* [[THRESYN-RXN]]
 +
* [[RXN-14003]]
 +
* [[1.2.1.13-RXN]]
 +
* [[ATPASE-RXN]]
 +
* [[GLUTAMINESYN-RXN]]
 +
* [[GLUTSEMIALDEHYDROG-RXN]]
 +
* [[QUINOLINATE-SYNTHA-RXN]]
 +
* [[RXN1G-4355]]
 +
* [[RXN-10949]]
 +
* [[RXN-14227]]
 +
* [[RXN-16910]]
 +
* [[FOLYLPOLYGLUTAMATESYNTH-RXN]]
 +
* [[RXN0-5408]]
 +
* [[INORGPYROPHOSPHAT-RXN]]
 +
* [[GLUTATHIONE-SYN-RXN]]
 +
* [[RXN-17753]]
 +
* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
 +
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
 +
* [[RXN0-5114]]
 +
* [[6.3.5.6-RXN]]
 +
* [[CHORISMATE-SYNTHASE-RXN]]
 +
* [[FORMATETHFLIG-RXN]]
 +
* [[RXN-5822]]
 +
* [[5-NUCLEOTID-RXN]]
 +
* [[RXN-12199]]
 +
* [[RXN1F-20]]
 +
* [[TREHALOSEPHOSPHA-RXN]]
 +
* [[GLYRIBONUCSYN-RXN]]
 +
* [[CTPSYN-RXN]]
 +
* [[RXN1G-1439]]
 +
* [[RXN1G-1438]]
 +
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
* [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
 +
* [[S-ADENMETSYN-RXN]]
 +
* [[RXN-14125]]
 +
* [[RXN1G-1435]]
 +
* [[PHOSPHOGLYCERATE-PHOSPHATASE-RXN]]
 +
* [[RXN1G-1437]]
 +
* [[3.1.3.67-RXN]]
 +
* [[RXN-14390]]
 +
* [[SAICARSYN-RXN]]
 +
* [[3.1.3.56-RXN]]
 +
* [[GUANOSINE-DIPHOSPHATASE-RXN]]
 +
* [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
 +
* [[PEPCARBOX-RXN]]
 +
* [[CARBPSYN-RXN]]
 +
* [[PSERPHOSPHA-RXN]]
 +
* [[RXN-7253]]
 +
* [[RXN-12200]]
 +
* [[RXN0-4261]]
 +
* [[GPH-RXN]]
 +
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 +
* [[GLUTCYSLIG-RXN]]
 +
* [[RXN-14187]]
 +
* [[5-FORMYL-THF-CYCLO-LIGASE-RXN]]
 +
* [[RXN-14325]]
 +
* [[ACID-PHOSPHATASE-RXN]]
 +
* [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
 +
* [[XMPXAN-RXN]]
 +
* [[PEPSYNTH-RXN]]
 +
* [[RXN-12197]]
 +
* [[RXN-12195]]
 +
* [[FORMYLTHFGLUSYNTH-RXN]]
 +
* [[MANNITOL-1-PHOSPHATASE-RXN]]
 +
* [[RXN-12198]]
 +
* [[RXN-9140]]
 +
* [[6.3.2.25-RXN]]
 +
* [[RXN-8988]]
 +
* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
 +
* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
 +
* [[RXN0-5055]]
 +
* [[3.1.3.57-RXN]]
 +
* [[CYSPH-RXN]]
 +
* [[3.1.3.46-RXN]]
 +
* [[RXN-7607]]
 +
* [[RXNQT-4142]]
 +
* [[AMP-DEPHOSPHORYLATION-RXN]]
 +
* [[RXN-15006]]
 +
* [[3-PHOSPHOGLYCERATE-PHOSPHATASE-RXN]]
 +
* [[RXN0-5073]]
 +
* [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
 +
* [[RXN-10939]]
 +
* [[RXN-10938]]
 +
* [[RXN-13202]]
 +
* [[RXN-5841]]
 +
* [[ATP-CITRATE-PRO-S--LYASE-RXN]]
 +
* [[RXN0-2921]]
 +
* [[3.6.3.6-RXN]]
 +
* [[3.1.3.16-RXN]]
 +
* [[PYRUVATE-CARBOXYLASE-RXN]]
 +
* [[NICOTINATEPRIBOSYLTRANS-RXN]]
 +
* [[RXN0-7250]]
 +
* [[LUMAZINESYN-RXN]]
 +
* [[RXN-14025]]
 +
* [[RXN-14024]]
 +
* [[RXN-14026]]
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
* [[RXN-10039]]
 +
* [[RXN-9]]
 +
* [[QUINOLINATE-SYNTHE-MULTI-RXN]]
 +
* [[3.6.4.4-RXN]]
 +
* [[RXN-14199]]
 +
* [[RXN-14198]]
 +
* [[APYRASE-RXN]]
 +
* [[RXN-14195]]
 +
* [[2.7.9.3-RXN]]
 +
* [[RXN1G-1436]]
 +
* [[RXN-14208]]
 +
* [[THYMIDINE-TRIPHOSPHATASE-RXN]]
 +
* [[RXN-7609]]
 +
* [[RXN-14201]]
 +
* [[RXN-14200]]
 +
* [[FGAMSYN-RXN]]
 +
== Reaction(s) of unknown directionality ==
 +
* [[DOLICHYLDIPHOSPHATASE-RXN]]
 +
* [[N-ACETYLGLUTPREDUCT-RXN]]
 +
* [[5.99.1.3-RXN]]
 +
* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
 +
* [[ATP-ADENYLYLTRANSFERASE-RXN]]
 +
* [[RXN-12196]]
 +
* [[PROPIONYL-COA-CARBOXY-RXN]]
 +
* [[RXN-13482]]
 +
* [[RXN-10862]]
 +
* [[DAHPSYN-RXN]]
 +
* [[2.5.1.19-RXN]]
 +
* [[RXN-14218]]
 +
* [[RXN-14215]]
 +
* [[RXN0-1061]]
 +
* [[RXN-14213]]
 +
* [[ASPCARBTRANS-RXN]]
 +
* [[RXN-12486]]
 +
* [[RXN0-3542]]
 +
* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
 +
* [[SUCCCOASYN-RXN]]
 +
* [[GAPOXNPHOSPHN-RXN]]
 +
* [[RXN-11135]]
 +
* [[NUCLEOSIDE-DIPHOSPHATASE-RXN]]
 +
* [[ATPSYN-RXN]]
 +
* [[ORNCARBAMTRANSFER-RXN]]
 +
* [[RXN-14220]]
 +
* [[2.7.7.8-RXN]]
 +
* [[INOPHOSPHOR-RXN]]
 +
* [[RXN-14205]]
 +
* [[R163-RXN]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 14265-44-2
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16945 16945]
+
* BIGG : 33499
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04125 R04125]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=3681305 3681305]
−
* UNIPROT:
+
* KNAPSACK : C00007408
−
** [http://www.uniprot.org/uniprot/P25285 P25285]
+
* HMDB : HMDB00973
−
** [http://www.uniprot.org/uniprot/P28337 P28337]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/P27248 P27248]
+
** [http://www.genome.jp/dbget-bin/www_bget?C00009 C00009]
−
** [http://www.uniprot.org/uniprot/Q9UZP8 Q9UZP8]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/Q9JVP2 Q9JVP2]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=43474 43474]
−
** [http://www.uniprot.org/uniprot/P48728 P48728]
+
* METABOLIGHTS : MTBLC43474
−
** [http://www.uniprot.org/uniprot/P49364 P49364]
+
{{#set: smiles=[O-]P(=O)(O)[O-]}}
−
** [http://www.uniprot.org/uniprot/P49095 P49095]
+
{{#set: inchi key=InChIKey=NBIIXXVUZAFLBC-UHFFFAOYSA-L}}
−
** [http://www.uniprot.org/uniprot/P49363 P49363]
+
{{#set: common name=phosphate}}
−
** [http://www.uniprot.org/uniprot/P54260 P54260]
+
{{#set: molecular weight=95.979    }}
−
** [http://www.uniprot.org/uniprot/P49361 P49361]
+
{{#set: common name=inorganic phosphate|phosphate-inorganic|Pi|orthophosphate|PO43-|HPO42-|HPO4-2}}
−
** [http://www.uniprot.org/uniprot/P49362 P49362]
+
{{#set: consumed by=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN|RXNQT-4141}}
−
** [http://www.uniprot.org/uniprot/O49954 O49954]
+
{{#set: produced by=DETHIOBIOTIN-SYN-RXN|HISTIDPHOS-RXN|SEDOHEPTULOSE-BISPHOSPHATASE-RXN|RXN-10953|6.3.5.7-RXN|3.6.3.1-RXN|RXN-10955|RXN-10954|RXN-11109|HISTIDPHOS-RXN[CCO-CYTOSOL]-L-HISTIDINOL-P/WATER//HISTIDINOL/Pi.49.|RXN-10952|PHOSPHATIDATE-PHOSPHATASE-RXN|PGPPHOSPHA-RXN|RXN0-5462|RXN3DJ-25|RXN-14219|RXN-14216|RXN-14217|RXN-14214|F16BDEPHOS-RXN|RXN-10034|DIHYDROFOLATESYNTH-RXN|THRESYN-RXN|RXN-14003|1.2.1.13-RXN|ATPASE-RXN|GLUTAMINESYN-RXN|GLUTSEMIALDEHYDROG-RXN|QUINOLINATE-SYNTHA-RXN|RXN1G-4355|RXN-10949|RXN-14227|RXN-16910|FOLYLPOLYGLUTAMATESYNTH-RXN|RXN0-5408|INORGPYROPHOSPHAT-RXN|GLUTATHIONE-SYN-RXN|RXN-17753|MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN|ACETYL-COA-CARBOXYLTRANSFER-RXN|RXN0-5114|6.3.5.6-RXN|CHORISMATE-SYNTHASE-RXN|FORMATETHFLIG-RXN|RXN-5822|5-NUCLEOTID-RXN|RXN-12199|RXN1F-20|TREHALOSEPHOSPHA-RXN|GLYRIBONUCSYN-RXN|CTPSYN-RXN|RXN1G-1439|RXN1G-1438|4-NITROPHENYLPHOSPHATASE-RXN|DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN|S-ADENMETSYN-RXN|RXN-14125|RXN1G-1435|PHOSPHOGLYCERATE-PHOSPHATASE-RXN|RXN1G-1437|3.1.3.67-RXN|RXN-14390|SAICARSYN-RXN|3.1.3.56-RXN|GUANOSINE-DIPHOSPHATASE-RXN|3-DEHYDROQUINATE-SYNTHASE-RXN|PEPCARBOX-RXN|CARBPSYN-RXN|PSERPHOSPHA-RXN|RXN-7253|RXN-12200|RXN0-4261|GPH-RXN|PROTEIN-TYROSINE-PHOSPHATASE-RXN|GLUTCYSLIG-RXN|RXN-14187|5-FORMYL-THF-CYCLO-LIGASE-RXN|RXN-14325|ACID-PHOSPHATASE-RXN|5-OXOPROLINASE-ATP-HYDROLYSING-RXN|XMPXAN-RXN|PEPSYNTH-RXN|RXN-12197|RXN-12195|FORMYLTHFGLUSYNTH-RXN|MANNITOL-1-PHOSPHATASE-RXN|RXN-12198|RXN-9140|6.3.2.25-RXN|RXN-8988|METHYLCROTONYL-COA-CARBOXYLASE-RXN|DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN|RXN0-5055|3.1.3.57-RXN|CYSPH-RXN|3.1.3.46-RXN|RXN-7607|RXNQT-4142|AMP-DEPHOSPHORYLATION-RXN|RXN-15006|3-PHOSPHOGLYCERATE-PHOSPHATASE-RXN|RXN0-5073|ADENYLOSUCCINATE-SYNTHASE-RXN|RXN-10939|RXN-10938|RXN-13202|RXN-5841|ATP-CITRATE-PRO-S--LYASE-RXN|RXN0-2921|3.6.3.6-RXN|3.1.3.16-RXN|PYRUVATE-CARBOXYLASE-RXN|NICOTINATEPRIBOSYLTRANS-RXN|RXN0-7250|LUMAZINESYN-RXN|RXN-14025|RXN-14024|RXN-14026|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-10039|RXN-9|QUINOLINATE-SYNTHE-MULTI-RXN|3.6.4.4-RXN|RXN-14199|RXN-14198|APYRASE-RXN|RXN-14195|2.7.9.3-RXN|RXN1G-1436|RXN-14208|THYMIDINE-TRIPHOSPHATASE-RXN|RXN-7609|RXN-14201|RXN-14200|FGAMSYN-RXN}}
−
** [http://www.uniprot.org/uniprot/P93256 P93256]
+
{{#set: reversible reaction associated=DOLICHYLDIPHOSPHATASE-RXN|N-ACETYLGLUTPREDUCT-RXN|5.99.1.3-RXN|SUCCINATE--COA-LIGASE-GDP-FORMING-RXN|ATP-ADENYLYLTRANSFERASE-RXN|RXN-12196|PROPIONYL-COA-CARBOXY-RXN|RXN-13482|RXN-10862|DAHPSYN-RXN|2.5.1.19-RXN|RXN-14218|RXN-14215|RXN0-1061|RXN-14213|ASPCARBTRANS-RXN|RXN-12486|RXN0-3542|ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN|SUCCCOASYN-RXN|GAPOXNPHOSPHN-RXN|RXN-11135|NUCLEOSIDE-DIPHOSPHATASE-RXN|ATPSYN-RXN|ORNCARBAMTRANSFER-RXN|RXN-14220|2.7.7.8-RXN|INOPHOSPHOR-RXN|RXN-14205|R163-RXN}}
−
** [http://www.uniprot.org/uniprot/O32955 O32955]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=aminomethyltransferase}}
+
−
{{#set: common name=Aminomethyltransferase}}
+
−
{{#set: ec number=EC-2.1.2.10}}
+
−
{{#set: gene associated=Ec-20_004610|Ec-24_001010|Ec-00_002470|Ec-07_004110}}
+
−
{{#set: in pathway=GLYCLEAV-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:50, 21 March 2018

Metabolite Pi

  • smiles:
    • [O-]P(=O)(O)[O-]
  • inchi key:
    • InChIKey=NBIIXXVUZAFLBC-UHFFFAOYSA-L
  • common name:
    • phosphate
  • molecular weight:
    • 95.979
  • Synonym(s):
    • inorganic phosphate
    • phosphate-inorganic
    • Pi
    • orthophosphate
    • PO43-
    • HPO42-
    • HPO4-2

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 14265-44-2
  • BIGG : 33499
  • PUBCHEM:
  • KNAPSACK : C00007408
  • HMDB : HMDB00973
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC43474
"O-]P(=O)(O)[O-" cannot be used as a page name in this wiki.



"HISTIDPHOS-RXN[CCO-CYTOSOL]-L-HISTIDINOL-P/WATER//HISTIDINOL/Pi.49." cannot be used as a page name in this wiki.
Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Pi&oldid=29690"