Difference between revisions of "PGLYCDEHYDROG-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OBTUSIFOLIOL OBTUSIFOLIOL] == * smiles: ** CC(C)C(=C)CCC(C)[CH]3(CCC4(C)(C2(CC[CH]1(C(C)C(O)CCC...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** Phosphoglycera...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OBTUSIFOLIOL OBTUSIFOLIOL] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] ==
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* smiles:
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* direction:
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** CC(C)C(=C)CCC(C)[CH]3(CCC4(C)(C2(CC[CH]1(C(C)C(O)CCC(C)1C=2CCC(C)34))))
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** REVERSIBLE
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* inchi key:
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** InChIKey=MMNYKQIDRZNIKT-VSADUBDNSA-N
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* common name:
 
* common name:
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** obtusifoliol
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** Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase
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* molecular weight:
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** D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
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** 426.724   
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** Allosteric substrate binding domain
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.95 EC-1.1.1.95]
 
* Synonym(s):
 
* Synonym(s):
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** 4α,14α-dimethyl-5α-ergosta-8,24(28)-dien-3β-ol
 
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** 4α,14α-dimethyl-24-methylene-5α-cholesta-8-en-3β-ol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[1.14.13.70-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NAD]][c] '''+''' 1 [[G3P]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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* [[CYCLOEUCALENOL-CYCLOISOMERASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 NAD+[c] '''+''' 1 3-phospho-D-glycerate[c] '''<=>''' 1 3-phospho-hydroxypyruvate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-17_000820]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-04_006300]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-11_000960]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203494 25203494]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12641 12641]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17791 17791]
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** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C01943 C01943]
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** [http://www.uniprot.org/uniprot/Q58424 Q58424]
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* HMDB : HMDB01242
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** [http://www.uniprot.org/uniprot/P43885 P43885]
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{{#set: smiles=CC(C)C(=C)CCC(C)[CH]3(CCC4(C)(C2(CC[CH]1(C(C)C(O)CCC(C)1C=2CCC(C)34))))}}
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** [http://www.uniprot.org/uniprot/P35136 P35136]
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{{#set: inchi key=InChIKey=MMNYKQIDRZNIKT-VSADUBDNSA-N}}
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** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
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{{#set: common name=obtusifoliol}}
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** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
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{{#set: molecular weight=426.724    }}
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** [http://www.uniprot.org/uniprot/P40510 P40510]
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{{#set: common name=4&alpha;,14&alpha;-dimethyl-5&alpha;-ergosta-8,24(28)-dien-3&beta;-ol|4&alpha;,14&alpha;-dimethyl-24-methylene-5&alpha;-cholesta-8-en-3&beta;-ol}}
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** [http://www.uniprot.org/uniprot/P40054 P40054]
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{{#set: consumed by=1.14.13.70-RXN}}
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** [http://www.uniprot.org/uniprot/O49485 O49485]
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{{#set: produced by=CYCLOEUCALENOL-CYCLOISOMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P87228 P87228]
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** [http://www.uniprot.org/uniprot/O04130 O04130]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase}}
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{{#set: common name=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain}}
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{{#set: common name=Allosteric substrate binding domain}}
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{{#set: ec number=EC-1.1.1.95}}
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{{#set: gene associated=Ec-17_000820|Ec-04_006300|Ec-11_000960}}
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{{#set: in pathway=SERSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:51, 21 March 2018

Reaction PGLYCDEHYDROG-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase
    • D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
    • Allosteric substrate binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 3-phospho-D-glycerate[c] <=> 1 3-phospho-hydroxypyruvate[c] + 1 H+[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






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