Difference between revisions of "DGDPKIN-RXN"

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(Created page with "Category:Gene == Gene Ec-14_006720 == * left end position: ** 6201803 * transcription direction: ** NEGATIVE * right end position: ** 6212659 * centisome position: ** 94.5...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGDPKIN-RXN DGDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-14_006720 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DGDPKIN-RXN DGDPKIN-RXN] ==
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* left end position:
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* direction:
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** 6201803
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** nucleoside diphosphate kinase
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* right end position:
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** Nucleoside diphosphate kinase
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** 6212659
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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** 94.533516   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0063_0073
 
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** Esi0063_0073
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[ATP]][c] '''+''' 1 [[DGDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DGTP]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 ATP[c] '''+''' 1 dGDP[c] '''=>''' 1 ADP[c] '''+''' 1 dGTP[c]
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* [[PWY-7511]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-22_003280]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-26_003930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-03_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-07_000140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_005170]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_004330]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-04_001140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7226]], guanosine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7226 PWY-7226]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6201803}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27690 27690]
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{{#set: right end position=6212659}}
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* LIGAND-RXN:
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{{#set: centisome position=94.533516    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01857 R01857]
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{{#set: common name=Esi_0063_0073|Esi0063_0073}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=UBIQUITIN--PROTEIN-LIGASE-RXN}}
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{{#set: common name=nucleoside diphosphate kinase}}
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{{#set: pathway associated=PWY-7511}}
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{{#set: common name=Nucleoside diphosphate kinase}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Ec-22_003280|Ec-26_003930|Ec-03_001380|Ec-07_000140|Ec-11_005170|Ec-11_004330|Ec-04_001140}}
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{{#set: in pathway=PWY-7222|PWY-7224|PWY-7226}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:51, 21 March 2018

Reaction DGDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nucleoside diphosphate kinase
    • Nucleoside diphosphate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 dGDP[c] => 1 ADP[c] + 1 dGTP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7222, guanosine deoxyribonucleotides de novo biosynthesis II: PWY-7222
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7224, purine deoxyribonucleosides salvage: PWY-7224
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7226, guanosine deoxyribonucleotides de novo biosynthesis I: PWY-7226
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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