Difference between revisions of "Ec-08 006010"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] == * direction: ** REVERSIBLE * common name: ** Phosphoglycera...")
 
(Created page with "Category:Gene == Gene Ec-08_006010 == * left end position: ** 5770101 * transcription direction: ** NEGATIVE * right end position: ** 5776490 * centisome position: ** 86.1...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGLYCDEHYDROG-RXN PGLYCDEHYDROG-RXN] ==
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== Gene Ec-08_006010 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 5770101
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* common name:
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* transcription direction:
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** Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase
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** NEGATIVE
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** D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
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* right end position:
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** Allosteric substrate binding domain
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** 5776490
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.95 EC-1.1.1.95]
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** 86.15864   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0005_0164
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** Esi0005_0164
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[NAD-KIN-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[G3P]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 NAD+[c] '''+''' 1 3-phospho-D-glycerate[c] '''<=>''' 1 3-phospho-hydroxypyruvate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
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== Pathways associated ==
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* [[PWY-5083]]
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== Genes associated with this reaction  ==
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* [[NADPHOS-DEPHOS-PWY-1]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7268]]
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* [[Ec-11_000960]]
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* [[PWY-7269]]
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** ESILICULOSUS_GENOME
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* [[NADPHOS-DEPHOS-PWY]]
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***EC-NUMBER
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* [[Ec-04_006300]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-17_000820]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5770101}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12641 12641]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5776490}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
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{{#set: centisome position=86.15864    }}
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* UNIPROT:
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{{#set: common name=Esi_0005_0164|Esi0005_0164}}
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** [http://www.uniprot.org/uniprot/Q58424 Q58424]
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{{#set: reaction associated=NAD-KIN-RXN}}
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** [http://www.uniprot.org/uniprot/P43885 P43885]
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{{#set: pathway associated=PWY-5083|NADPHOS-DEPHOS-PWY-1|PWY-7268|PWY-7269|NADPHOS-DEPHOS-PWY}}
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** [http://www.uniprot.org/uniprot/P35136 P35136]
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** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
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** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
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** [http://www.uniprot.org/uniprot/P40510 P40510]
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** [http://www.uniprot.org/uniprot/P40054 P40054]
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** [http://www.uniprot.org/uniprot/O49485 O49485]
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** [http://www.uniprot.org/uniprot/P87228 P87228]
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** [http://www.uniprot.org/uniprot/O04130 O04130]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase}}
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{{#set: common name=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain}}
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{{#set: common name=Allosteric substrate binding domain}}
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{{#set: ec number=EC-1.1.1.95}}
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{{#set: gene associated=Ec-11_000960|Ec-04_006300|Ec-17_000820}}
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{{#set: in pathway=SERSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:51, 21 March 2018

Gene Ec-08_006010

  • left end position:
    • 5770101
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5776490
  • centisome position:
    • 86.15864
  • Synonym(s):
    • Esi_0005_0164
    • Esi0005_0164

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-08_006010&oldid=29767"