Difference between revisions of "Ec-12 004080"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8450 RXN-8450] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Ec-12_004080 == * left end position: ** 3780420 * transcription direction: ** NEGATIVE * right end position: ** 3789527 * centisome position: ** 45.3...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8450 RXN-8450] ==
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== Gene Ec-12_004080 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3780420
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11.23 EC-1.14.11.23]
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** NEGATIVE
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* right end position:
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** 3789527
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* centisome position:
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** 45.350246   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0090_0023
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** Esi0090_0023
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** EDEM1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.113-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-7087]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[MYRICETIN]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 2-oxoglutarate[c] '''+''' 1 (+)-dihydromyricetin[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 succinate[c] '''+''' 1 myricetin[c] '''+''' 1 H2O[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-19_002750]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-19_002760]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-08_003510]]
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY-3101]], flavonol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3101 PWY-3101]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5391]], syringetin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5391 PWY-5391]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3780420}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06539 R06539]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3789527}}
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{{#set: ec number=EC-1.14.11.23}}
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{{#set: centisome position=45.350246    }}
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{{#set: gene associated=Ec-19_002750|Ec-19_002760|Ec-08_003510}}
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{{#set: common name=Esi_0090_0023|Esi0090_0023|EDEM1}}
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{{#set: in pathway=PWY-3101|PWY-5391}}
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{{#set: reaction associated=3.2.1.113-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:51, 21 March 2018

Gene Ec-12_004080

  • left end position:
    • 3780420
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3789527
  • centisome position:
    • 45.350246
  • Synonym(s):
    • Esi_0090_0023
    • Esi0090_0023
    • EDEM1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_004080&oldid=29797"