Difference between revisions of "CPD-11444"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-ACETYLTRANSFER-RXN ACETYL-COA-ACETYLTRANSFER-RXN] == * direction: ** REVERSIBLE * common...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11444 CPD-11444] == * smiles: ** C(=O)([O-])CCC5(=C4(NC(CC1(NC(=C(CC([O-])=O)C(CCC(=O)[O-])...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYL-COA-ACETYLTRANSFER-RXN ACETYL-COA-ACETYLTRANSFER-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11444 CPD-11444] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C(=O)([O-])CCC5(=C4(NC(CC1(NC(=C(CC([O-])=O)C(CCC(=O)[O-])=1)CC2(NC(=C(C(CCC(=O)[O-])=2)CC(=O)[O-])CC3(=C(CCC([O-])=O)C(CC(=O)[O-])=C(N3)C4))))=C(CC(=O)[O-])5))
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* inchi key:
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** InChIKey=QTTNOSKSLATGQB-UHFFFAOYSA-F
 
* common name:
 
* common name:
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** Thiolase, C-terminal
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** uroporphyrinogen-I
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** Acetyl-CoA acetyltransferase
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* molecular weight:
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* ec number:
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** 828.742   
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** [http://enzyme.expasy.org/EC/2.3.1.9 EC-2.3.1.9]
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* Synonym(s):
 
* Synonym(s):
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** uroporphyrinogen I
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 2 [[ACETYL-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[ACETOACETYL-COA]][c]
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* [[RXN-14396]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 2 acetyl-CoA[c] '''<=>''' 1 coenzyme A[c] '''+''' 1 acetoacetyl-CoA[c]
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* [[RXN-10642]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-26_003940]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-24_000870]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-22_002850]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate): [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5177]], glutaryl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5177 PWY-5177]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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* [[P163-PWY]], L-lysine fermentation to acetate and butanoate: [http://metacyc.org/META/NEW-IMAGE?object=P163-PWY P163-PWY]
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** '''1''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6883]], pyruvate fermentation to butanol II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5676]], acetyl-CoA fermentation to butanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5676 PWY-5676]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6588]], pyruvate fermentation to acetone: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6588 PWY-6588]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7779]], methyl tert-butyl ether degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7779 PWY-7779]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7778]], 2-methylpropene degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7778 PWY-7778]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY1-3]], polyhydroxybutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1-3 PWY1-3]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
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** '''6''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-6876]], isopropanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6876 PWY-6876]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[CENTFERM-PWY]], pyruvate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5741]], ethylmalonyl-CoA pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5741 PWY-5741]
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** '''1''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[ACETOACETATE-DEG-PWY]], acetoacetate degradation (to acetyl CoA): [http://metacyc.org/META/NEW-IMAGE?object=ACETOACETATE-DEG-PWY ACETOACETATE-DEG-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY66-367]], ketogenesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-367 PWY66-367]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7216]], (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7216 PWY-7216]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-368]], ketolysis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-368 PWY66-368]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7401 PWY-7401]
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** '''4''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21036 21036]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25201940 25201940]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R00238 R00238]
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** [http://www.chemspider.com/Chemical-Structure.389644.html 389644]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q8CAY6 Q8CAY6]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=62626 62626]
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** [http://www.uniprot.org/uniprot/P41338 P41338]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P45362 P45362]
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** [http://www.genome.jp/dbget-bin/www_bget?C05766 C05766]
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** [http://www.uniprot.org/uniprot/Q9BWD1 Q9BWD1]
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* HMDB : HMDB02211
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** [http://www.uniprot.org/uniprot/P45359 P45359]
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{{#set: smiles=C(=O)([O-])CCC5(=C4(NC(CC1(NC(=C(CC([O-])=O)C(CCC(=O)[O-])=1)CC2(NC(=C(C(CCC(=O)[O-])=2)CC(=O)[O-])CC3(=C(CCC([O-])=O)C(CC(=O)[O-])=C(N3)C4))))=C(CC(=O)[O-])5))}}
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** [http://www.uniprot.org/uniprot/P24752 P24752]
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{{#set: inchi key=InChIKey=QTTNOSKSLATGQB-UHFFFAOYSA-F}}
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** [http://www.uniprot.org/uniprot/Q12598 Q12598]
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{{#set: common name=uroporphyrinogen-I}}
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** [http://www.uniprot.org/uniprot/P45369 P45369]
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{{#set: molecular weight=828.742    }}
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** [http://www.uniprot.org/uniprot/P46707 P46707]
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{{#set: common name=uroporphyrinogen I}}
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** [http://www.uniprot.org/uniprot/P73825 P73825]
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{{#set: produced by=RXN-14396}}
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** [http://www.uniprot.org/uniprot/Q43637 Q43637]
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{{#set: reversible reaction associated=RXN-10642}}
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** [http://www.uniprot.org/uniprot/Q9UQW6 Q9UQW6]
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** [http://www.uniprot.org/uniprot/Q9Z3Y4 Q9Z3Y4]
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** [http://www.uniprot.org/uniprot/P77852 P77852]
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** [http://www.uniprot.org/uniprot/Q9XD81 Q9XD81]
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** [http://www.uniprot.org/uniprot/Q9ZGI9 Q9ZGI9]
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** [http://www.uniprot.org/uniprot/Q9L8E0 Q9L8E0]
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** [http://www.uniprot.org/uniprot/P14611 P14611]
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** [http://www.uniprot.org/uniprot/P07097 P07097]
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** [http://www.uniprot.org/uniprot/P17764 P17764]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Thiolase, C-terminal}}
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{{#set: common name=Acetyl-CoA acetyltransferase}}
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{{#set: ec number=EC-2.3.1.9}}
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{{#set: gene associated=Ec-26_003940|Ec-24_000870|Ec-22_002850}}
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{{#set: in pathway=P162-PWY|PWY-5177|PWY-6583|P163-PWY|PWY-6883|PWY-5676|PWY-6588|PWY-7779|PWY-7778|PWY1-3|PWY-5789|PWY-6876|CENTFERM-PWY|PWY-7391|PWY-5741|PWY-6174|ACETOACETATE-DEG-PWY|PWY66-367|PWY-7216|PWY-922|PWY66-368|PWY-7401|PWY-6863|PWY-7524}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:51, 21 March 2018

Metabolite CPD-11444

  • smiles:
    • C(=O)([O-])CCC5(=C4(NC(CC1(NC(=C(CC([O-])=O)C(CCC(=O)[O-])=1)CC2(NC(=C(C(CCC(=O)[O-])=2)CC(=O)[O-])CC3(=C(CCC([O-])=O)C(CC(=O)[O-])=C(N3)C4))))=C(CC(=O)[O-])5))
  • inchi key:
    • InChIKey=QTTNOSKSLATGQB-UHFFFAOYSA-F
  • common name:
    • uroporphyrinogen-I
  • molecular weight:
    • 828.742
  • Synonym(s):
    • uroporphyrinogen I

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(=O)([O-])CCC5(=C4(NC(CC1(NC(=C(CC([O-])=O)C(CCC(=O)[O-])=1)CC2(NC(=C(C(CCC(=O)[O-])=2)CC(=O)[O-])CC3(=C(CCC([O-])=O)C(CC(=O)[O-])=C(N3)C4))))=C(CC(=O)[O-])5))" cannot be used as a page name in this wiki.




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