Difference between revisions of "RXN-10696"

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(Created page with "Category:Gene == Gene Ec-26_004120 == * left end position: ** 4365756 * transcription direction: ** POSITIVE * right end position: ** 4375368 * centisome position: ** 66.3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10696 RXN-10696] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl-CoA oxidase/dehydrogen...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-26_004120 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10696 RXN-10696] ==
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* left end position:
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* direction:
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** 4365756
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Acyl-CoA oxidase/dehydrogenase, central domain
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* right end position:
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** acyl-CoA oxidase, partial
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** 4375368
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** acyl-CoA oxidase
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* centisome position:
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* ec number:
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** 66.31513   
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0349_0004
 
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** Esi0349_0004
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[2PGADEHYDRAT-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-11517]][c] '''=>''' 1 [[CPD-11518]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[aragem]]
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** 1 oxygen[c] '''+''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA[c] '''=>''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-2-enoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
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** [[pantograph]]-[[aragem]]
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* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Ec-22_002920]]
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* [[GLYCOLYSIS]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6901]]
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*** Assignment: EC-NUMBER
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* [[P124-PWY]]
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* Gene: [[Ec-26_004320]]
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* [[PWY-6886]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[P341-PWY]]
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*** Assignment: EC-NUMBER
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* [[PWY-1622]]
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* Gene: [[Ec-08_006390]]
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* [[GLUCONEO-PWY]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6707]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[PWY-1042]]
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== Pathways  ==
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* [[NPGLUCAT-PWY]]
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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* [[PWY-5723]]
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** '''10''' reactions found over '''19''' reactions in the full pathway
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* [[ANAGLYCOLYSIS-PWY]]
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== Reconstruction information  ==
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* [[PWY-5484]]
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* Category: [[annotation]]
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* [[PWY-7124]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-6142]]
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*** Tool: [[pathwaytools]]
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* [[PWY-7003]]
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* [[PWY-2221]]
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* [[PWY-6416]]
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* [[PWY-6163]]
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* [[PWY-7218]]
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* [[QUINATEDEG-PWY]]
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* [[P122-PWY]]
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* [[PWY66-399]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=4365756}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
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{{#set: right end position=4375368}}
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{{#set: common name=acyl-CoA oxidase, partial}}
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{{#set: centisome position=66.31513    }}
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{{#set: common name=acyl-CoA oxidase}}
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{{#set: common name=Esi_0349_0004|Esi0349_0004}}
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{{#set: ec number=EC-1.3.3.6}}
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{{#set: reaction associated=2PGADEHYDRAT-RXN|3-DEHYDROQUINATE-DEHYDRATASE-RXN}}
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{{#set: gene associated=Ec-22_002920|Ec-26_004320|Ec-08_006390}}
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{{#set: pathway associated=GLYCOLYSIS|PWY-6901|P124-PWY|PWY-6886|P341-PWY|PWY-1622|GLUCONEO-PWY|PWY-6707|PWY-1042|NPGLUCAT-PWY|PWY-5723|ANAGLYCOLYSIS-PWY|PWY-5484|PWY-7124|PWY-6142|PWY-7003|PWY-2221|PWY-6416|PWY-6163|PWY-7218|QUINATEDEG-PWY|P122-PWY|PWY66-399}}
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{{#set: in pathway=PWY-735}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:51, 21 March 2018

Reaction RXN-10696

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acyl-CoA oxidase/dehydrogenase, central domain
    • acyl-CoA oxidase, partial
    • acyl-CoA oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA[c] => 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-2-enoyl-CoA[c] + 1 hydrogen peroxide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 10 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-10696&oldid=29840"