Difference between revisions of "RXN-8975"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15895 CPD-15895] == * smiles: ** [CH](=O)C(O)C(O)C(COP([O-])([O-])=O)O * inchi key: ** InCh...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8975 RXN-8975] == * direction: ** REVERSIBLE * common name: ** phospho-N-acetylmuramoyl-pentape...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15895 CPD-15895] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8975 RXN-8975] ==
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* smiles:
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* direction:
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** [CH](=O)C(O)C(O)C(COP([O-])([O-])=O)O
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** REVERSIBLE
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* inchi key:
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** InChIKey=PPQRONHOSHZGFQ-LMVFSUKVSA-L
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* common name:
 
* common name:
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** keto-D-ribose 5-phosphate
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** phospho-N-acetylmuramoyl-pentapeptide-transferase
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* molecular weight:
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* ec number:
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** 228.095   
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** [http://enzyme.expasy.org/EC/2.7.8.13 EC-2.7.8.13]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-15346]]
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** 1 [[CPD-9646]][c] '''+''' 1 [[C3]][c] '''<=>''' 1 [[UMP]][c] '''+''' 1 [[C4]][c]
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* [[RXN-14997]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 di-trans,octa-cis-undecaprenyl phosphate[c] '''+''' 1 UDP-N-acetyl-&alpha;-D-muramoyl-L-alanyl-&gamma;-D-glutamyl-L-lysyl-D-alanyl-D-alanine[c] '''<=>''' 1 UMP[c] '''+''' 1 undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-&gamma;-D-glutamyl-L-lysyl- D-alanyl-D-alanine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-07_007020]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PWY-6471]], peptidoglycan biosynthesis IV (Enterococcus faecium): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6471 PWY-6471]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5265]], peptidoglycan biosynthesis II (staphylococci): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5265 PWY-5265]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21115541 21115541]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21920 21920]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58273 58273]
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** [http://www.genome.jp/dbget-bin/www_bget?R05629 R05629]
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{{#set: smiles=[CH](=O)C(O)C(O)C(COP([O-])([O-])=O)O}}
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{{#set: direction=REVERSIBLE}}
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{{#set: inchi key=InChIKey=PPQRONHOSHZGFQ-LMVFSUKVSA-L}}
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{{#set: common name=phospho-N-acetylmuramoyl-pentapeptide-transferase}}
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{{#set: common name=keto-D-ribose 5-phosphate}}
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{{#set: ec number=EC-2.7.8.13}}
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{{#set: molecular weight=228.095    }}
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{{#set: gene associated=Ec-07_007020}}
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{{#set: produced by=RXN-15346|RXN-14997}}
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{{#set: in pathway=PWY-6471|PWY-5265}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:53, 21 March 2018

Reaction RXN-8975

  • direction:
    • REVERSIBLE
  • common name:
    • phospho-N-acetylmuramoyl-pentapeptide-transferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 di-trans,octa-cis-undecaprenyl phosphate[c] + 1 UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine[c] <=> 1 UMP[c] + 1 undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6471, peptidoglycan biosynthesis IV (Enterococcus faecium): PWY-6471
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5265, peptidoglycan biosynthesis II (staphylococci): PWY-5265
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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