Difference between revisions of "RNA-Holder"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNA-RXN ASNSYNA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparagine synthase (gl...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RNA-Holder RNA-Holder] == * common name: ** RNA * Synonym(s): == Reaction(s) known to consume...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNA-RXN ASNSYNA-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RNA-Holder RNA-Holder] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** asparagine synthase (glutamine-hydrolyzing)
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** RNA
** Asparagine synthase, glutamine-hydrolyzing
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.1.1 EC-6.3.1.1]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[3.1.27.1-RXN]]
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ASN]][c]
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* [[3.1.27.5-RXN]]
* With common name(s):
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== Reaction(s) known to produce the compound ==
** 1 L-aspartate[c] '''+''' 1 ammonium[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 L-asparagine[c]
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== Reaction(s) of unknown directionality ==
 
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* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
== Genes associated with this reaction  ==
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* [[RNA-DIRECTED-RNA-POLYMERASE-RXN]]
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-15_004750]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-28_000990]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-15_003670]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[ASPARAGINESYN-PWY]], L-asparagine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINESYN-PWY ASPARAGINESYN-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=RNA}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11372 11372]
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{{#set: consumed by=3.1.27.1-RXN|3.1.27.5-RXN}}
* LIGAND-RXN:
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{{#set: reversible reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN|RNA-DIRECTED-RNA-POLYMERASE-RXN}}
** [http://www.genome.jp/dbget-bin/www_bget?R00483 R00483]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P00963 P00963]
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** [http://www.uniprot.org/uniprot/P08243 P08243]
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** [http://www.uniprot.org/uniprot/P44338 P44338]
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** [http://www.uniprot.org/uniprot/P49088 P49088]
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** [http://www.uniprot.org/uniprot/P54264 P54264]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=asparagine synthase (glutamine-hydrolyzing)}}
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{{#set: common name=Asparagine synthase, glutamine-hydrolyzing}}
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{{#set: ec number=EC-6.3.1.1}}
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{{#set: gene associated=Ec-15_004750|Ec-28_000990|Ec-15_003670}}
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{{#set: in pathway=ASPARAGINESYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:53, 21 March 2018

Metabolite RNA-Holder

  • common name:
    • RNA
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links