Difference between revisions of "RXN-14796"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEAMINASE-RXN AMP-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosine/A...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14796 RXN-14796] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase, partial *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEAMINASE-RXN AMP-DEAMINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14796 RXN-14796] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Adenosine/AMP deaminase domain
+
** acyl-CoA oxidase, partial
−
** AMP deaminase
+
** Acyl-CoA oxidase/dehydrogenase, central domain
 +
** acyl-CoA oxidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.17 EC-3.5.4.17]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
−
** [http://enzyme.expasy.org/EC/3.5.4.6 EC-3.5.4.6]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[AMP]][c] '''=>''' 1 [[IMP]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-15684]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-15685]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 H2O[c] '''+''' 1 AMP[c] '''=>''' 1 IMP[c] '''+''' 1 ammonium[c]
+
** 1 oxygen[c] '''+''' 1 5-cis, 7-trans-tetradecadienoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-00_010560]]
+
* Gene: [[Ec-26_004320]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
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*** Assignment: EC-NUMBER
−
* [[Ec-04_006560]]
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* Gene: [[Ec-22_002920]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-08_006390]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
+
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14777 14777]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00181 R00181]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P10759 P10759]
 
−
** [http://www.uniprot.org/uniprot/Q02356 Q02356]
 
−
** [http://www.uniprot.org/uniprot/P23109 P23109]
 
−
** [http://www.uniprot.org/uniprot/P15274 P15274]
 
−
** [http://www.uniprot.org/uniprot/Q7M3H8 Q7M3H8]
 
−
** [http://www.uniprot.org/uniprot/Q01433 Q01433]
 
−
** [http://www.uniprot.org/uniprot/Q01432 Q01432]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Adenosine/AMP deaminase domain}}
+
{{#set: common name=acyl-CoA oxidase, partial}}
−
{{#set: common name=AMP deaminase}}
+
{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
−
{{#set: ec number=EC-3.5.4.17}}
+
{{#set: common name=acyl-CoA oxidase}}
−
{{#set: ec number=EC-3.5.4.6}}
+
{{#set: ec number=EC-1.3.3.6}}
−
{{#set: gene associated=Ec-00_010560|Ec-04_006560}}
+
{{#set: gene associated=Ec-26_004320|Ec-22_002920|Ec-08_006390}}
−
{{#set: in pathway=PWY-6596}}
+
{{#set: in pathway=PWY-7340}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 20:53, 21 March 2018

Reaction RXN-14796

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA oxidase, partial
    • Acyl-CoA oxidase/dehydrogenase, central domain
    • acyl-CoA oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 5-cis, 7-trans-tetradecadienoyl-CoA[c] => 1 hydrogen peroxide[c] + 1 2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): PWY-7340
    • 1 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14796&oldid=30085"