Difference between revisions of "HOMSUCTRAN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DXPREDISOM-RXN DXPREDISOM-RXN] == * direction: ** REVERSIBLE * common name: ** 1-deoxy-D-xylulose 5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMSUCTRAN-RXN HOMSUCTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DXPREDISOM-RXN DXPREDISOM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMSUCTRAN-RXN HOMSUCTRAN-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.267 EC-1.1.1.267]
+
** [http://enzyme.expasy.org/EC/2.3.1.46 EC-2.3.1.46]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[DEOXYXYLULOSE-5P]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[HOMO-SER]][c] '''+''' 1 [[SUC-COA]][c] '''=>''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-C-methyl-D-erythritol 4-phosphate[c] '''+''' 1 NADP+[c] '''<=>''' 1 1-deoxy-D-xylulose 5-phosphate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c]
+
** 1 L-homoserine[c] '''+''' 1 succinyl-CoA[c] '''=>''' 1 O-succinyl-L-homoserine[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-12_007940]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
+
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[gap-filling]]
−
** Source: [[orthology-aragem]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[meneco]]
−
* Category: [[annotation]]
+
**** Comment: [[added for gapfilling]]
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13717 13717]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22008 22008]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05688 R05688]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01777 R01777]
−
{{#set: direction=REVERSIBLE}}
+
* UNIPROT:
−
{{#set: common name=1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal}}
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** [http://www.uniprot.org/uniprot/Q9PLV2 Q9PLV2]
−
{{#set: ec number=EC-1.1.1.267}}
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** [http://www.uniprot.org/uniprot/Q9CEC5 Q9CEC5]
−
{{#set: gene associated=Ec-12_007940}}
+
** [http://www.uniprot.org/uniprot/P07623 P07623]
−
{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: ec number=EC-2.3.1.46}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: in pathway=HOMOSER-METSYN-PWY}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
 +
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 19:53, 21 March 2018

Reaction HOMSUCTRAN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

Reconstruction information

External links




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