Difference between revisions of "ORNDECARBOX-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-02_004150 == * left end position: ** 4451715 * transcription direction: ** POSITIVE * right end position: ** 4465763 * centisome position: ** 68.1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ornithine decar...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-02_004150 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] ==
−
* left end position:
+
* direction:
−
** 4451715
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** Ornithine decarboxylase
−
* right end position:
+
* ec number:
−
** 4465763
+
** [http://enzyme.expasy.org/EC/4.1.1.17 EC-4.1.1.17]
−
* centisome position:
+
−
** 68.19634   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0041_0160
 
−
** Esi0041_0160
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ATPASE-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[L-ORNITHINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PUTRESCINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
−
***go-term
+
* With common name(s):
−
== Pathways associated ==
+
** 1 L-ornithine[c] '''+''' 1 H+[c] '''=>''' 1 putrescine[c] '''+''' 1 CO2[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-11_003270]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[ORNDEG-PWY]], superpathway of ornithine degradation: [http://metacyc.org/META/NEW-IMAGE?object=ORNDEG-PWY ORNDEG-PWY]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-46]], putrescine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=4451715}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22964 22964]
−
{{#set: right end position=4465763}}
+
* LIGAND-RXN:
−
{{#set: centisome position=68.19634    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670]
−
{{#set: common name=Esi_0041_0160|Esi0041_0160}}
+
* UNIPROT:
−
{{#set: reaction associated=ATPASE-RXN}}
+
** [http://www.uniprot.org/uniprot/P24169 P24169]
 +
** [http://www.uniprot.org/uniprot/P27121 P27121]
 +
** [http://www.uniprot.org/uniprot/P27116 P27116]
 +
** [http://www.uniprot.org/uniprot/P27120 P27120]
 +
** [http://www.uniprot.org/uniprot/P43099 P43099]
 +
** [http://www.uniprot.org/uniprot/Q9X2I6 Q9X2I6]
 +
** [http://www.uniprot.org/uniprot/P08432 P08432]
 +
** [http://www.uniprot.org/uniprot/P27118 P27118]
 +
** [http://www.uniprot.org/uniprot/P11926 P11926]
 +
** [http://www.uniprot.org/uniprot/P14019 P14019]
 +
** [http://www.uniprot.org/uniprot/P00860 P00860]
 +
** [http://www.uniprot.org/uniprot/P09057 P09057]
 +
** [http://www.uniprot.org/uniprot/Q9TZZ6 Q9TZZ6]
 +
** [http://www.uniprot.org/uniprot/P44317 P44317]
 +
** [http://www.uniprot.org/uniprot/O66940 O66940]
 +
** [http://www.uniprot.org/uniprot/P27119 P27119]
 +
** [http://www.uniprot.org/uniprot/P49725 P49725]
 +
** [http://www.uniprot.org/uniprot/P50134 P50134]
 +
** [http://www.uniprot.org/uniprot/P93351 P93351]
 +
** [http://www.uniprot.org/uniprot/P93357 P93357]
 +
** [http://www.uniprot.org/uniprot/O15696 O15696]
 +
** [http://www.uniprot.org/uniprot/Q84527 Q84527]
 +
** [http://www.uniprot.org/uniprot/P41931 P41931]
 +
** [http://www.uniprot.org/uniprot/O69865 O69865]
 +
** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Ornithine decarboxylase}}
 +
{{#set: ec number=EC-4.1.1.17}}
 +
{{#set: gene associated=Ec-11_003270}}
 +
{{#set: in pathway=ORNDEG-PWY|PWY-6305|PWY-46}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:54, 21 March 2018

Reaction ORNDECARBOX-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ornithine decarboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ORNDEG-PWY, superpathway of ornithine degradation: ORNDEG-PWY
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6305, putrescine biosynthesis IV: PWY-6305
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-46, putrescine biosynthesis III: PWY-46
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=ORNDECARBOX-RXN&oldid=30117"