Difference between revisions of "Ec-14 003590"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11474 RXN-11474] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-glutaryl-[acp] methyl...")
(Created page with "Category:Gene == Gene Ec-14_003590 == * left end position: ** 3289648 * transcription direction: ** NEGATIVE * right end position: ** 3304208 * centisome position: ** 50.1...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11474 RXN-11474] ==
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== Gene Ec-14_003590 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3289648
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* common name:
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* transcription direction:
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** 3-oxo-glutaryl-[acp] methyl ester synthase
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** NEGATIVE
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** Thiolase-like, subgroup
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* right end position:
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** Beta-ketoacyl synthase, N-terminal
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** 3304208
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** beta-ketoacyl synthase, partial
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* centisome position:
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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** 50.143803   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0206_0035
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** Esi0206_0035
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** PAO1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-13398]]
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** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[Malonyl-acp-methyl-ester]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-Ketoglutaryl-ACP-methyl-ester]][c] '''+''' 1 [[ACP]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 a malonyl-[acp] methyl ester[c] '''=>''' 1 CO2[c] '''+''' 1 a 3-oxo-glutaryl-[acp] methyl ester[c] '''+''' 1 a holo-[acyl-carrier protein][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_000650]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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*** Assignment: go-term
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* Gene: [[Ec-12_000640]]
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* Reaction: [[RXN-17252]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: automated-name-match
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* Gene: [[Ec-27_003480]]
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* Reaction: [[RXN-7676]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: go-term
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* Gene: [[Ec-27_002090]]
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* Reaction: [[RXN-7677]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: go-term
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== Pathways  ==
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* Reaction: [[RXN-7740]]
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* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
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** '''7''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5068]]
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* [[PWY-5098]]
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* [[PWY-6927]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3289648}}
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{{#set: common name=3-oxo-glutaryl-[acp] methyl ester synthase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: right end position=3304208}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: centisome position=50.143803    }}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: common name=Esi_0206_0035|Esi0206_0035|PAO1}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: reaction associated=RXN-13398|RXN-17252|RXN-7676|RXN-7677|RXN-7740}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: pathway associated=PWY-5068|PWY-5098|PWY-6927}}
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{{#set: gene associated=Ec-12_000650|Ec-12_000640|Ec-27_003480|Ec-27_002090}}
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{{#set: in pathway=PWY-6519}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:54, 21 March 2018

Gene Ec-14_003590

  • left end position:
    • 3289648
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3304208
  • centisome position:
    • 50.143803
  • Synonym(s):
    • Esi_0206_0035
    • Esi0206_0035
    • PAO1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_003590&oldid=30118"