Difference between revisions of "RXN-13431"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14789 RXN-14789] == * direction: ** LEFT-TO-RIGHT * common name: ** Acyl-CoA oxidase/dehydrogen...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13431 RXN-13431] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14789 RXN-14789] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13431 RXN-13431] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** Acyl-CoA oxidase/dehydrogenase, central domain
 
** acyl-CoA oxidase, partial
 
** acyl-CoA oxidase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-15677]][c] '''=>''' 1 [[CPD-15661]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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** 9 [[MALONYL-COA]][c] '''+''' 13 [[NADPH]][c] '''+''' 21 [[PROTON]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 13 [[NADP]][c] '''+''' 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''+''' 9 [[CARBON-DIOXIDE]][c] '''+''' 8 [[WATER]][c] '''+''' 10 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
** 1 oxygen[c] '''+''' 1 4-trans-undecenoyl-CoA[c] '''=>''' 1 2-trans, 4-trans-undecadienoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
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** 9 malonyl-CoA[c] '''+''' 13 NADPH[c] '''+''' 21 H+[c] '''+''' 1 acetyl-CoA[c] '''=>''' 13 NADP+[c] '''+''' 1 icosapentaenoate[c] '''+''' 9 CO2[c] '''+''' 8 H2O[c] '''+''' 10 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Ec-08_006390]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-26_004320]]
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
* [[Ec-22_002920]]
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7338]], 10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7338 PWY-7338]
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* [[PWY-7050]], icosapentaenoate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7050 PWY-7050]
** '''3''' reactions found over '''12''' reactions in the full pathway
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
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* Category: [[gap-filling]]
** [[pathwaytools]]:
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
*** [[esiliculosus_genome]]
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*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
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{{#set: ec number=EC-2.3.1}}
{{#set: common name=acyl-CoA oxidase, partial}}
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{{#set: in pathway=PWY-7050}}
{{#set: common name=acyl-CoA oxidase}}
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{{#set: reconstruction category=gap-filling}}
{{#set: ec number=EC-1.3.3.6}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: gene associated=Ec-08_006390|Ec-26_004320|Ec-22_002920}}
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{{#set: reconstruction tool=meneco}}
{{#set: in pathway=PWY-7338}}
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{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:54, 21 March 2018

Reaction RXN-13431

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7050, icosapentaenoate biosynthesis IV (bacteria): PWY-7050
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links