Difference between revisions of "RXN0-5330"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5330 RXN0-5330] == * direction: ** LEFT-TO-RIGHT * common name: ** NADH dehydrogenase (ubiquin...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5330 RXN0-5330] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** NADH dehydrogenase (ubiquinone)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
+
** [http://enzyme.expasy.org/EC/1.6.5.9 EC-1.6.5.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-14423]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-14424]][c]
+
** 1 [[Ubiquinones]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Ubiquinols]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-oxo-docosapentaenoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c]
+
** 1 a ubiquinone[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 an ubiquinol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-18_003900]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-05_005740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-02_006350]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
+
* [[PWY0-1567]], NADH to cytochrome bo oxidase electron transfer II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1567 PWY0-1567]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
+
* [[PWY0-1568]], NADH to cytochrome bd oxidase electron transport II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1568 PWY0-1568]
−
** '''14''' reactions found over '''14''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
+
* [[PWY-7269]], NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7269 PWY-7269]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23152 23152]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.1.1.330}}
+
{{#set: common name=NADH dehydrogenase (ubiquinone)}}
−
{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
+
{{#set: ec number=EC-1.6.5.9}}
 +
{{#set: gene associated=Ec-18_003900|Ec-05_005740|Ec-02_006350}}
 +
{{#set: in pathway=PWY0-1567|PWY0-1568|PWY-7269|PWY-7279}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:54, 21 March 2018

Reaction RXN0-5330

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NADH dehydrogenase (ubiquinone)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a ubiquinone[c] + 1 H+[c] + 1 NADH[c] => 1 NAD+[c] + 1 an ubiquinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1567, NADH to cytochrome bo oxidase electron transfer II: PWY0-1567
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1568, NADH to cytochrome bd oxidase electron transport II: PWY0-1568
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7269, NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): PWY-7269
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7279, aerobic respiration II (cytochrome c) (yeast): PWY-7279
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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