Difference between revisions of "RXN-9557"

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(Created page with "Category:Gene == Gene Ec-02_001740 == * left end position: ** 2056185 * transcription direction: ** NEGATIVE * right end position: ** 2061999 * centisome position: ** 31.4...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9557 RXN-9557] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxy-cis-vaccenoyl-[acyl...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Ec-02_001740 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9557 RXN-9557] ==
* left end position:
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* direction:
** 2056185
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** NEGATIVE
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** 3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase
* right end position:
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* ec number:
** 2061999
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
* centisome position:
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** 31.498941   
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* Synonym(s):
 
* Synonym(s):
** Esi_0055_0060
 
** Esi0055_0060
 
** APX
 
  
== Reactions associated ==
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== Reaction Formula ==
* [[PEROXID-RXN]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[R-3-hydroxy-cis-vaccenoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[cis-vaccen-2-enoyl-ACPs]][c]
***go-term
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* With common name(s):
* [[RXN-12440]]
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** 1 (R)-3-hydroxy-cis-vacc-11-enoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a (2-trans-11-cis)-vaccen-2-enoyl-[acp][c]
** esiliculosus_genome
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***ec-number
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== Genes associated with this reaction  ==
* [[RXN-14240]]
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== Pathways ==
** esiliculosus_genome
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* [[PWY-5973]], cis-vaccenate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5973 PWY-5973]
***go-term
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** '''5''' reactions found over '''5''' reactions in the full pathway
* [[RXN-15288]]
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== Reconstruction information  ==
** esiliculosus_genome
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* Category: [[gap-filling]]
***go-term
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
* [[RXN-17352]]
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*** Tool: [[meneco]]
** esiliculosus_genome
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**** Comment: [[added for gapfilling]]
***go-term
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* [[RXN-3521]]
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** esiliculosus_genome
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***ec-number
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* [[RXN-8635]]
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** esiliculosus_genome
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***go-term
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== Pathways associated ==
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* [[PWY-7214]]
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* [[PWY-6824]]
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* [[PWY-6959]]
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* [[PWY-5461]]
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* [[PWY-7445]]
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* [[PWY-5469]]
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* [[PWY-5466]]
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* [[PWY-6960]]
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* [[PWY-6961]]
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* [[PWY-2261]]
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== External links  ==
 
== External links  ==
{{#set: left end position=2056185}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase}}
{{#set: right end position=2061999}}
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{{#set: ec number=EC-4.2.1.59}}
{{#set: centisome position=31.498941    }}
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{{#set: in pathway=PWY-5973}}
{{#set: common name=Esi_0055_0060|Esi0055_0060|APX}}
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{{#set: reconstruction category=gap-filling}}
{{#set: reaction associated=PEROXID-RXN|RXN-12440|RXN-14240|RXN-15288|RXN-17352|RXN-3521|RXN-8635}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: pathway associated=PWY-7214|PWY-6824|PWY-6959|PWY-5461|PWY-7445|PWY-5469|PWY-5466|PWY-6960|PWY-6961|PWY-2261}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 20:54, 21 March 2018

Reaction RXN-9557

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5973, cis-vaccenate biosynthesis: PWY-5973
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

"3-hydroxy-cis-vaccenoyl-[acyl-carrier protein] dehydratase" cannot be used as a page name in this wiki.