Difference between revisions of "TIGLYLCOA-HYDROXY-RXN"

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(Created page with "Category:Gene == Gene Ec-16_003560 == * left end position: ** 3683275 * transcription direction: ** NEGATIVE * right end position: ** 3690548 * centisome position: ** 69.0...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TIGLYLCOA-HYDROXY-RXN TIGLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common name: ** Tiglyl...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-16_003560 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TIGLYLCOA-HYDROXY-RXN TIGLYLCOA-HYDROXY-RXN] ==
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* left end position:
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* direction:
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** 3683275
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** REVERSIBLE
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* transcription direction:
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* common name:
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** NEGATIVE
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** Tiglyl-CoA hydratase
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* right end position:
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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** 3690548
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* centisome position:
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** ClpP/crotonase-like domain
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** 69.0055   
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* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0030_0175
 
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** Esi0030_0175
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ENOYL-COA-HYDRAT-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[2-METHYL-3-HYDROXY-BUTYRYL-COA]][c] '''<=>''' 1 [[CPD-1083]][c] '''+''' 1 [[WATER]][c]
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***ec-number
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* With common name(s):
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* [[METHYLACYLYLCOA-HYDROXY-RXN]]
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** 1 (2S,3S)-3-hydroxy-2-methylbutanoyl-CoA[c] '''<=>''' 1 (E)-2-methylcrotonoyl-CoA[c] '''+''' 1 H2O[c]
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** esiliculosus_genome
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-10697]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-16_003560]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-10704]]
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*** Assignment: EC-NUMBER
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** esiliculosus_genome
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* Gene: [[Ec-16_001250]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-10705]]
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*** Assignment: EC-NUMBER
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** esiliculosus_genome
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* Gene: [[Ec-06_001380]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-11244]]
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*** Assignment: EC-NUMBER
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** esiliculosus_genome
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* Gene: [[Ec-14_006530]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-12567]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** esiliculosus_genome
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** Source: [[orthology-aragem]]
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***ec-number
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* Gene: [[Ec-17_000320]]
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* [[RXN-13616]]
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** Source: [[orthology-aragem]]
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** esiliculosus_genome
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== Pathways ==
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***ec-number
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* [[PWY-5109]], 2-methylbutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
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* [[RXN-14266]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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** esiliculosus_genome
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* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
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***ec-number
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[RXN-14272]]
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== Reconstruction information  ==
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** esiliculosus_genome
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* Category: [[orthology]]
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***ec-number
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** Source: [[orthology-aragem]]
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* [[RXN-14273]]
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*** Tool: [[pantograph]]
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** esiliculosus_genome
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* Category: [[annotation]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-16135]]
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*** Tool: [[pathwaytools]]
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** esiliculosus_genome
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***ec-number
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* [[RXN-16558]]
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** esiliculosus_genome
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***ec-number
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* [[RXN-17114]]
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** esiliculosus_genome
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***ec-number
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* [[RXN-17475]]
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** esiliculosus_genome
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***ec-number
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* [[RXN-17776]]
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** esiliculosus_genome
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***ec-number
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* [[RXN-17780]]
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** esiliculosus_genome
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−
***ec-number
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* [[RXN-17785]]
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** esiliculosus_genome
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***ec-number
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* [[RXN-17789]]
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** esiliculosus_genome
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***ec-number
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* [[RXN-2425]]
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** esiliculosus_genome
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***ec-number
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* [[RXN-902]]
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** esiliculosus_genome
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***ec-number
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* [[RXN0-5393]]
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** esiliculosus_genome
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***ec-number
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* [[TIGLYLCOA-HYDROXY-RXN]]
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** esiliculosus_genome
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***ec-number
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−
== Pathways associated ==
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* [[PWY-6435]]
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* [[PWY-7656]]
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* [[PWY-7046]]
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* [[PWY-81]]
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* [[PWY-1361]]
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* [[PWY-735]]
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* [[PWY-7606]]
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* [[PWY-5109]]
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* [[PWY0-321]]
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* [[VALDEG-PWY]]
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[PWY-5138]]
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* [[PWY66-391]]
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* [[PWY-5136]]
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* [[PWY-6863]]
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* [[PWY-7007]]
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* [[ILEUDEG-PWY]]
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* [[PWY0-1337]]
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* [[FAO-PWY]]
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* [[PWY-7726]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3683275}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31119 31119]
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{{#set: right end position=3690548}}
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* LIGAND-RXN:
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{{#set: centisome position=69.0055    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04204 R04204]
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{{#set: common name=Esi_0030_0175|Esi0030_0175}}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=ENOYL-COA-HYDRAT-RXN|METHYLACYLYLCOA-HYDROXY-RXN|RXN-10697|RXN-10704|RXN-10705|RXN-11244|RXN-12567|RXN-13616|RXN-14266|RXN-14272|RXN-14273|RXN-16135|RXN-16558|RXN-17114|RXN-17475|RXN-17776|RXN-17780|RXN-17785|RXN-17789|RXN-2425|RXN-902|RXN0-5393|TIGLYLCOA-HYDROXY-RXN}}
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{{#set: common name=Tiglyl-CoA hydratase}}
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{{#set: pathway associated=PWY-6435|PWY-7656|PWY-7046|PWY-81|PWY-1361|PWY-735|PWY-7606|PWY-5109|PWY0-321|VALDEG-PWY|PWY-7094|PWY-7654|PWY-5138|PWY66-391|PWY-5136|PWY-6863|PWY-7007|ILEUDEG-PWY|PWY0-1337|FAO-PWY|PWY-7726}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
 +
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
 +
{{#set: common name=ClpP/crotonase-like domain}}
 +
{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Ec-16_003560|Ec-16_001250|Ec-06_001380|Ec-14_006530|Ec-17_000320}}
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{{#set: in pathway=PWY-5109|ILEUDEG-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:54, 21 March 2018

Reaction TIGLYLCOA-HYDROXY-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Tiglyl-CoA hydratase
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • ClpP/crotonase-like domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5109, 2-methylbutanoate biosynthesis: PWY-5109
    • 4 reactions found over 6 reactions in the full pathway
  • ILEUDEG-PWY, L-isoleucine degradation I: ILEUDEG-PWY
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links






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