Difference between revisions of "RXN-7682"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PRENAL PRENAL] == * smiles: ** CC(=CC=O)C * inchi key: ** InChIKey=SEPQTYODOKLVSB-UHFFFAOYSA-N...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7682 RXN-7682] == * direction: ** LEFT-TO-RIGHT * common name: ** xanthine dehydrogenase * ec n...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PRENAL PRENAL] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7682 RXN-7682] ==
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* smiles:
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* direction:
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** CC(=CC=O)C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=SEPQTYODOKLVSB-UHFFFAOYSA-N
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* common name:
 
* common name:
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** 3-methyl-2-butenal
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** xanthine dehydrogenase
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* molecular weight:
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* ec number:
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** 84.118   
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** [http://enzyme.expasy.org/EC/1.17.1.4 EC-1.17.1.4]
 
* Synonym(s):
 
* Synonym(s):
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** 3-methylbut-2-enal
 
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** 3,3-dimethyl-acrylaldehyde
 
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** prenal
 
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** 3-methylcrotonaldehyde
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[1.8.3.5-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[HYPOXANTHINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[XANTHINE]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-11989]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 NAD+[c] '''+''' 1 hypoxanthine[c] '''+''' 1 H2O[c] '''=>''' 1 NADH[c] '''+''' 1 xanthine[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-20_000210]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-20_000230]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
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** '''4''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=61020 61020]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24670 24670]
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* HMDB : HMDB12157
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* LIGAND-RXN:
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* LIGAND-CPD:
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** [http://www.genome.jp/dbget-bin/www_bget?R01768 R01768]
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** [http://www.genome.jp/dbget-bin/www_bget?C07330 C07330]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEMSPIDER:
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{{#set: common name=xanthine dehydrogenase}}
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** [http://www.chemspider.com/Chemical-Structure.10820046.html 10820046]
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{{#set: ec number=EC-1.17.1.4}}
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* CHEBI:
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{{#set: gene associated=Ec-20_000210|Ec-20_000230}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15825 15825]
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{{#set: in pathway=P164-PWY|PWY-6596|SALVADEHYPOX-PWY}}
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* METABOLIGHTS : MTBLC15825
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: smiles=CC(=CC=O)C}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: inchi key=InChIKey=SEPQTYODOKLVSB-UHFFFAOYSA-N}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: common name=3-methyl-2-butenal}}
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{{#set: molecular weight=84.118    }}
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{{#set: common name=3-methylbut-2-enal|3,3-dimethyl-acrylaldehyde|prenal|3-methylcrotonaldehyde}}
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{{#set: produced by=1.8.3.5-RXN|RXN-11989}}
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Latest revision as of 20:54, 21 March 2018

Reaction RXN-7682

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xanthine dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 hypoxanthine[c] + 1 H2O[c] => 1 NADH[c] + 1 xanthine[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 4 reactions found over 17 reactions in the full pathway
  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 6 reactions found over 8 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II: SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-7682&oldid=30193"