Difference between revisions of "HOMOACONITATE-HYDRATASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10705 RXN-10705] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOACONITATE-HYDRATASE-RXN HOMOACONITATE-HYDRATASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOACONITATE-HYDRATASE-RXN HOMOACONITATE-HYDRATASE-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Homoaconitate hydratase |
| − | + | ||
| − | + | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/4.2.1. | + | ** [http://enzyme.expasy.org/EC/4.2.1.36 EC-4.2.1.36] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[WATER]][c] '''+''' 1 [[ | + | ** 1 [[WATER]][c] '''+''' 1 [[HOMO-CIS-ACONITATE]][c] '''=>''' 1 [[HOMO-I-CIT]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 H2O[c] '''+''' 1 | + | ** 1 H2O[c] '''+''' 1 cis-homoaconitate[c] '''=>''' 1 (1R,2S)-homoisocitrate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[Ec- | + | * Gene: [[Ec-13_001950]] |
| − | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | + | *** Assignment: EC-NUMBER | |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | ***EC-NUMBER | + | |
== Pathways == | == Pathways == | ||
| − | * [[PWY- | + | * [[PWY-3081]], L-lysine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3081 PWY-3081] |
| − | ** '''10''' reactions found over ''' | + | ** '''3''' reactions found over '''10''' reactions in the full pathway |
| + | * [[P241-PWY]], coenzyme B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=P241-PWY P241-PWY] | ||
| + | ** '''2''' reactions found over '''16''' reactions in the full pathway | ||
| + | * [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY] | ||
| + | ** '''3''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[annotation]] | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15485 15485] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R04371 R04371] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/Q58409 Q58409] | ||
| + | ** [http://www.uniprot.org/uniprot/P49367 P49367] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9UT74 Q9UT74] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Homoaconitate hydratase}} |
| − | + | {{#set: ec number=EC-4.2.1.36}} | |
| − | + | {{#set: gene associated=Ec-13_001950}} | |
| − | {{#set: ec number=EC-4.2.1. | + | {{#set: in pathway=PWY-3081|P241-PWY|LYSINE-AMINOAD-PWY}} |
| − | {{#set: gene associated=Ec- | + | |
| − | {{#set: in pathway=PWY- | + | |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
| − | |||
Latest revision as of 20:54, 21 March 2018
Contents
Reaction HOMOACONITATE-HYDRATASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- Homoaconitate hydratase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 HOMO-CIS-ACONITATE[c] => 1 HOMO-I-CIT[c]
- With common name(s):
- 1 H2O[c] + 1 cis-homoaconitate[c] => 1 (1R,2S)-homoisocitrate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-13_001950
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: annotation-esiliculosus_genome
Pathways
- PWY-3081, L-lysine biosynthesis V: PWY-3081
- 3 reactions found over 10 reactions in the full pathway
- P241-PWY, coenzyme B biosynthesis: P241-PWY
- 2 reactions found over 16 reactions in the full pathway
- LYSINE-AMINOAD-PWY, L-lysine biosynthesis IV: LYSINE-AMINOAD-PWY
- 3 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
