Difference between revisions of "THIOREDOXIN-REDUCT-NADPH-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11135 RXN-11135] == * direction: ** REVERSIBLE * common name: ** DNA helicase (DNA repair), Rad...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11135 RXN-11135] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** DNA helicase (DNA repair), Rad3 type
+
** FAD-dependent pyridine nucleotide-disulphide oxidoreductase
−
** DNA helicase
+
** Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
 +
** Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.4.12 EC-3.6.4.12]
+
** [http://enzyme.expasy.org/EC/1.8.1.9 EC-1.8.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Double-helix-DNA]][c] '''<=>''' 1 [[Unwound-DNA]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Red-Thioredoxin]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 H2O[c] '''+''' 1 a double-helix DNA[c] '''<=>''' 1 an unwound double-stranded DNA[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
+
** 1 an oxidized thioredoxin[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a reduced thioredoxin[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-16_002340]]
+
* Gene: [[Ec-02_005330]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* Gene: [[Ec-15_001630]]
+
* Gene: [[Ec-19_001510]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_004520]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[THIOREDOX-PWY]], thioredoxin pathway: [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOX-PWY THIOREDOX-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=DNA helicase (DNA repair), Rad3 type}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
−
{{#set: common name=DNA helicase}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-3.6.4.12}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
−
{{#set: gene associated=Ec-16_002340|Ec-15_001630}}
+
* UNIPROT:
−
{{#set: in pathway=}}
+
** [http://www.uniprot.org/uniprot/Q05741 Q05741]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P56431 P56431]
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
** [http://www.uniprot.org/uniprot/O28718 O28718]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P80880 P80880]
 +
** [http://www.uniprot.org/uniprot/P43496 P43496]
 +
** [http://www.uniprot.org/uniprot/P94284 P94284]
 +
** [http://www.uniprot.org/uniprot/O66790 O66790]
 +
** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
 +
** [http://www.uniprot.org/uniprot/P47348 P47348]
 +
** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
 +
** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
 +
** [http://www.uniprot.org/uniprot/O26804 O26804]
 +
** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
 +
** [http://www.uniprot.org/uniprot/P43788 P43788]
 +
** [http://www.uniprot.org/uniprot/Q58931 Q58931]
 +
** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
 +
** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
 +
** [http://www.uniprot.org/uniprot/P23160 P23160]
 +
** [http://www.uniprot.org/uniprot/P39916 P39916]
 +
** [http://www.uniprot.org/uniprot/Q39242 Q39242]
 +
** [http://www.uniprot.org/uniprot/Q39243 Q39243]
 +
** [http://www.uniprot.org/uniprot/P38816 P38816]
 +
** [http://www.uniprot.org/uniprot/Q25861 Q25861]
 +
** [http://www.uniprot.org/uniprot/P29509 P29509]
 +
** [http://www.uniprot.org/uniprot/P52213 P52213]
 +
** [http://www.uniprot.org/uniprot/Q16881 Q16881]
 +
** [http://www.uniprot.org/uniprot/P75531 P75531]
 +
** [http://www.uniprot.org/uniprot/P74746 P74746]
 +
** [http://www.uniprot.org/uniprot/P46843 P46843]
 +
** [http://www.uniprot.org/uniprot/O54535 O54535]
 +
** [http://www.uniprot.org/uniprot/Q39951 Q39951]
 +
** [http://www.uniprot.org/uniprot/Q92375 Q92375]
 +
** [http://www.uniprot.org/uniprot/P52215 P52215]
 +
** [http://www.uniprot.org/uniprot/P51978 P51978]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=FAD-dependent pyridine nucleotide-disulphide oxidoreductase}}
 +
{{#set: common name=Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain}}
 +
{{#set: common name=Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain}}
 +
{{#set: ec number=EC-1.8.1.9}}
 +
{{#set: gene associated=Ec-02_005330|Ec-19_001510|Ec-19_004520}}
 +
{{#set: in pathway=THIOREDOX-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:54, 21 March 2018

Reaction THIOREDOXIN-REDUCT-NADPH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • FAD-dependent pyridine nucleotide-disulphide oxidoreductase
    • Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
    • Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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