Difference between revisions of "CPD-653"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-722 RXN0-722] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diphosphate re...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-653 CPD-653] == * smiles: ** C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-722 RXN0-722] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-653 CPD-653] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)
 +
* inchi key:
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** InChIKey=IDBZKGQRLBFUFQ-VPHRTNKSSA-L
 
* common name:
 
* common name:
** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
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** (S)-NADHX
** EsV-1-128
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* molecular weight:
** EsV-1-180
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** 681.445   
** Ribonucleoside-diphosphate reductase small chain
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* ec number:
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
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* Synonym(s):
 
* Synonym(s):
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** (6S)-6-β-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[UDP]][c] '''+''' 1 [[Reduced-NrdH-Proteins]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[DUDP]][c] '''+''' 1 [[Oxidized-NrdH-Proteins]][c]
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* [[RXN-12753]]
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 UDP[c] '''+''' 1 a reduced NrdH glutaredoxin-like protein[c] '''=>''' 1 H2O[c] '''+''' 1 dUDP[c] '''+''' 1 an oxidized NrdH glutaredoxin-like protein[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-21_002920]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_005570]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-06_005120]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-11_002170]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-19_000440]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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** '''14''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
{{#set: common name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203523 25203523]
{{#set: common name=EsV-1-128}}
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* CHEBI:
{{#set: common name=EsV-1-180}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=64074 64074]
{{#set: common name=Ribonucleoside-diphosphate reductase small chain}}
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* LIGAND-CPD:
{{#set: ec number=EC-1.17.4.1}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04856 C04856]
{{#set: gene associated=Ec-21_002920|Ec-06_005570|Ec-06_005120|Ec-11_002170|Ec-19_000440}}
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* HMDB : HMDB59644
{{#set: in pathway=PWY0-166}}
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{{#set: smiles=C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)}}
{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=IDBZKGQRLBFUFQ-VPHRTNKSSA-L}}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=(S)-NADHX}}
{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: molecular weight=681.445    }}
 +
{{#set: common name=(6S)-6-β-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide}}
 +
{{#set: produced by=RXN-12753}}

Latest revision as of 19:54, 21 March 2018

Metabolite CPD-653

  • smiles:
    • C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)
  • inchi key:
    • InChIKey=IDBZKGQRLBFUFQ-VPHRTNKSSA-L
  • common name:
    • (S)-NADHX
  • molecular weight:
    • 681.445
  • Synonym(s):
    • (6S)-6-β-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine dinucleotide

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C1(=C(CCC(O)N1C5(OC(COP(=O)([O-])OP(=O)([O-])OCC2(OC(C(O)C(O)2)N4(C=NC3(C(N)=NC=NC=34))))C(O)C(O)5))C(N)=O)" cannot be used as a page name in this wiki.