Difference between revisions of "Ec-10 004980"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-722 RXN0-722] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diphosphate re...")
(Created page with "Category:Gene == Gene Ec-10_004980 == * left end position: ** 5080912 * transcription direction: ** POSITIVE * right end position: ** 5085424 * centisome position: ** 78.1...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-722 RXN0-722] ==
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== Gene Ec-10_004980 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5080912
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* common name:
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* transcription direction:
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** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
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** POSITIVE
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** EsV-1-128
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* right end position:
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** EsV-1-180
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** 5085424
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** Ribonucleoside-diphosphate reductase small chain
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* centisome position:
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* ec number:
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** 78.15604   
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0183_0064
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** Esi0183_0064
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** FBA1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[F16ALDOLASE-RXN]]
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** 1 [[Reduced-NrdH-Proteins]][c] '''+''' 1 [[UDP]][c] '''=>''' 1 [[Oxidized-NrdH-Proteins]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[DUDP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 a reduced NrdH glutaredoxin-like protein[c] '''+''' 1 UDP[c] '''=>''' 1 an oxidized NrdH glutaredoxin-like protein[c] '''+''' 1 H2O[c] '''+''' 1 dUDP[c]
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* Reaction: [[RXN-8631]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-06_005120]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-11_002170]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-21_002920]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_005570]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-19_000440]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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** '''14''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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* Reaction: [[SEDOBISALDOL-RXN]]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-1042]]
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* [[P341-PWY]]
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* [[PWY66-373]]
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* [[GLUCONEO-PWY]]
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* [[GLYCOLYSIS]]
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* [[SUCSYN-PWY]]
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* [[PWY-7385]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[CALVIN-PWY]]
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* [[PWY0-1517]]
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* [[PWY-1861]]
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* [[PWY-6142]]
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* [[PWY-5484]]
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* [[P185-PWY]]
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* [[PWY66-399]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=5080912}}
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{{#set: common name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=EsV-1-128}}
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{{#set: right end position=5085424}}
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{{#set: common name=EsV-1-180}}
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{{#set: centisome position=78.15604    }}
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{{#set: common name=Ribonucleoside-diphosphate reductase small chain}}
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{{#set: common name=Esi_0183_0064|Esi0183_0064|FBA1}}
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{{#set: ec number=EC-1.17.4.1}}
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{{#set: reaction associated=F16ALDOLASE-RXN|RXN-8631|SEDOBISALDOL-RXN}}
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{{#set: gene associated=Ec-06_005120|Ec-11_002170|Ec-21_002920|Ec-06_005570|Ec-19_000440}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|SUCSYN-PWY|PWY-7385|ANAGLYCOLYSIS-PWY|CALVIN-PWY|PWY0-1517|PWY-1861|PWY-6142|PWY-5484|P185-PWY|PWY66-399}}
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{{#set: in pathway=PWY0-166}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:54, 21 March 2018

Gene Ec-10_004980

  • left end position:
    • 5080912
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5085424
  • centisome position:
    • 78.15604
  • Synonym(s):
    • Esi_0183_0064
    • Esi0183_0064
    • FBA1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_004980&oldid=30228"