Difference between revisions of "Ec-10 004980"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-722 RXN0-722] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diphosphate re...")
(Created page with "Category:Gene == Gene Ec-10_004980 == * left end position: ** 5080912 * transcription direction: ** POSITIVE * right end position: ** 5085424 * centisome position: ** 78.1...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-722 RXN0-722] ==
+
== Gene Ec-10_004980 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 5080912
−
* common name:
+
* transcription direction:
−
** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
+
** POSITIVE
−
** EsV-1-128
+
* right end position:
−
** EsV-1-180
+
** 5085424
−
** Ribonucleoside-diphosphate reductase small chain
+
* centisome position:
−
* ec number:
+
** 78.15604   
−
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0183_0064
 +
** Esi0183_0064
 +
** FBA1
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[F16ALDOLASE-RXN]]
−
** 1 [[Reduced-NrdH-Proteins]][c] '''+''' 1 [[UDP]][c] '''=>''' 1 [[Oxidized-NrdH-Proteins]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[DUDP]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 a reduced NrdH glutaredoxin-like protein[c] '''+''' 1 UDP[c] '''=>''' 1 an oxidized NrdH glutaredoxin-like protein[c] '''+''' 1 H2O[c] '''+''' 1 dUDP[c]
+
* Reaction: [[RXN-8631]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-06_005120]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-11_002170]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-21_002920]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-06_005570]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-19_000440]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
+
−
** '''14''' reactions found over '''17''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: go-term
 +
* Reaction: [[SEDOBISALDOL-RXN]]
 +
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 +
* [[PWY-1042]]
 +
* [[P341-PWY]]
 +
* [[PWY66-373]]
 +
* [[GLUCONEO-PWY]]
 +
* [[GLYCOLYSIS]]
 +
* [[SUCSYN-PWY]]
 +
* [[PWY-7385]]
 +
* [[ANAGLYCOLYSIS-PWY]]
 +
* [[CALVIN-PWY]]
 +
* [[PWY0-1517]]
 +
* [[PWY-1861]]
 +
* [[PWY-6142]]
 +
* [[PWY-5484]]
 +
* [[P185-PWY]]
 +
* [[PWY66-399]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=5080912}}
−
{{#set: common name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=EsV-1-128}}
+
{{#set: right end position=5085424}}
−
{{#set: common name=EsV-1-180}}
+
{{#set: centisome position=78.15604    }}
−
{{#set: common name=Ribonucleoside-diphosphate reductase small chain}}
+
{{#set: common name=Esi_0183_0064|Esi0183_0064|FBA1}}
−
{{#set: ec number=EC-1.17.4.1}}
+
{{#set: reaction associated=F16ALDOLASE-RXN|RXN-8631|SEDOBISALDOL-RXN}}
−
{{#set: gene associated=Ec-06_005120|Ec-11_002170|Ec-21_002920|Ec-06_005570|Ec-19_000440}}
+
{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|SUCSYN-PWY|PWY-7385|ANAGLYCOLYSIS-PWY|CALVIN-PWY|PWY0-1517|PWY-1861|PWY-6142|PWY-5484|P185-PWY|PWY66-399}}
−
{{#set: in pathway=PWY0-166}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:54, 21 March 2018

Gene Ec-10_004980

  • left end position:
    • 5080912
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5085424
  • centisome position:
    • 78.15604
  • Synonym(s):
    • Esi_0183_0064
    • Esi0183_0064
    • FBA1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_004980&oldid=30228"