Difference between revisions of "Ec-00 000550"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TIGLYLCOA-HYDROXY-RXN TIGLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common name: ** Tiglyl...")
(Created page with "Category:Gene == Gene Ec-00_000550 == * left end position: ** 750971 * transcription direction: ** NEGATIVE * right end position: ** 755533 * centisome position: ** 3.9636...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TIGLYLCOA-HYDROXY-RXN TIGLYLCOA-HYDROXY-RXN] ==
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== Gene Ec-00_000550 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 750971
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* common name:
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* transcription direction:
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** Tiglyl-CoA hydratase
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** NEGATIVE
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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* right end position:
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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** 755533
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** ClpP/crotonase-like domain
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* centisome position:
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* ec number:
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** 3.963654   
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* Synonym(s):
 
* Synonym(s):
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** Esi_1124_0001
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** Esi1124_0001
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.4.1.198-RXN]]
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** 1 [[2-METHYL-3-HYDROXY-BUTYRYL-COA]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-1083]][c]
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* With common name(s):
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** 1 (2S,3S)-3-hydroxy-2-methylbutanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 (E)-2-methylcrotonoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-14_006530]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[aragem]]
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* [[Ec-17_000320]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-06_001380]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-16_001250]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-16_003560]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5109]], 2-methylbutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=750971}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31119 31119]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=755533}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04204 R04204]
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{{#set: centisome position=3.963654    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Esi_1124_0001|Esi1124_0001}}
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{{#set: common name=Tiglyl-CoA hydratase}}
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{{#set: reaction associated=2.4.1.198-RXN}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Ec-14_006530|Ec-17_000320|Ec-06_001380|Ec-16_001250|Ec-16_003560}}
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{{#set: in pathway=PWY-5109|ILEUDEG-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:55, 21 March 2018

Gene Ec-00_000550

  • left end position:
    • 750971
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 755533
  • centisome position:
    • 3.963654
  • Synonym(s):
    • Esi_1124_0001
    • Esi1124_0001

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_000550&oldid=30231"