Difference between revisions of "Ec-20 001720"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1983 RXN3O-1983] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
 
(Created page with "Category:Gene == Gene Ec-20_001720 == * left end position: ** 1725008 * transcription direction: ** NEGATIVE * right end position: ** 1731680 * centisome position: ** 33.4...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-1983 RXN3O-1983] ==
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== Gene Ec-20_001720 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1725008
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* transcription direction:
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** NEGATIVE
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* right end position:
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** 1731680
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* centisome position:
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** 33.45359   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0023_0058
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** Esi0023_0058
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** IDO
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[INDOLE-23-DIOXYGENASE-RXN]]
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** 1 [[HOMO-CIT]][c] '''=>''' 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 (2R)-homocitrate[c] '''=>''' 1 cis-homoaconitate[c] '''+''' 1 H2O[c]
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* Reaction: [[RXN-8664]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[RXN-8665]]
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* [[PWY-3081]], L-lysine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3081 PWY-3081]
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** Source: [[annotation-esiliculosus_genome]]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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*** Assignment: automated-name-match
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* [[P241-PWY]], coenzyme B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=P241-PWY P241-PWY]
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== Pathways associated ==
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** '''2''' reactions found over '''16''' reactions in the full pathway
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* [[TRPCAT-PWY]]
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* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY]
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* [[PWY-7717]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7765]]
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== Reconstruction information  ==
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* [[PWY-7430]]
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* [[annotation]]:
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* [[PWY-6309]]
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** [[pathwaytools]]:
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* [[PWY-5651]]
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1725008}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03444 R03444]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1731680}}
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{{#set: in pathway=PWY-3081|P241-PWY|LYSINE-AMINOAD-PWY}}
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{{#set: centisome position=33.45359    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=Esi_0023_0058|Esi0023_0058|IDO}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reaction associated=INDOLE-23-DIOXYGENASE-RXN|RXN-8664|RXN-8665}}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: pathway associated=TRPCAT-PWY|PWY-7717|PWY-7765|PWY-7430|PWY-6309|PWY-5651}}

Latest revision as of 20:55, 21 March 2018

Gene Ec-20_001720

  • left end position:
    • 1725008
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1731680
  • centisome position:
    • 33.45359
  • Synonym(s):
    • Esi_0023_0058
    • Esi0023_0058
    • IDO

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-20_001720&oldid=30239"