Difference between revisions of "Ec-21 002920"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Gene == Gene Ec-21_002920 == * left end position: ** 3964445 * transcription direction: ** POSITIVE * right end position: ** 3978722 * centisome position: ** 53.7...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] ==
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== Gene Ec-21_002920 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3964445
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* common name:
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* transcription direction:
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** FAD-dependent pyridine nucleotide-disulphide oxidoreductase
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** POSITIVE
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** Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
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* right end position:
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** Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain
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** 3978722
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.8.1.9 EC-1.8.1.9]
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** 53.7179   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0387_0012
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** Esi0387_0012
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADPREDUCT-RXN]]
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** 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Red-Thioredoxin]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 an oxidized thioredoxin[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a reduced thioredoxin[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-19_001510]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-02_005330]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-19_004520]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[THIOREDOX-PWY]], thioredoxin pathway: [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOX-PWY THIOREDOX-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Reaction: [[CDPREDUCT-RXN]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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* Reaction: [[GDPREDUCT-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN0-722]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN0-747]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN0-748]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[UDPREDUCT-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PWY-7226]]
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* [[PWY-6545]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3964445}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3978722}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
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{{#set: centisome position=53.7179    }}
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* UNIPROT:
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{{#set: common name=Esi_0387_0012|Esi0387_0012}}
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** [http://www.uniprot.org/uniprot/Q05741 Q05741]
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{{#set: reaction associated=ADPREDUCT-RXN|CDPREDUCT-RXN|GDPREDUCT-RXN|RIBONUCLEOSIDE-DIP-REDUCTI-RXN|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|RXN0-722|RXN0-747|RXN0-748|UDPREDUCT-RXN}}
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** [http://www.uniprot.org/uniprot/P56431 P56431]
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7220|PWY-7184|PWY-7222|PWY0-166|PWY-7227|PWY-7226|PWY-6545}}
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** [http://www.uniprot.org/uniprot/O28718 O28718]
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** [http://www.uniprot.org/uniprot/P80880 P80880]
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** [http://www.uniprot.org/uniprot/P43496 P43496]
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** [http://www.uniprot.org/uniprot/P94284 P94284]
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** [http://www.uniprot.org/uniprot/O66790 O66790]
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** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
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** [http://www.uniprot.org/uniprot/P47348 P47348]
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** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
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** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
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** [http://www.uniprot.org/uniprot/O26804 O26804]
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** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
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** [http://www.uniprot.org/uniprot/P43788 P43788]
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** [http://www.uniprot.org/uniprot/Q58931 Q58931]
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** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
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** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
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** [http://www.uniprot.org/uniprot/P23160 P23160]
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** [http://www.uniprot.org/uniprot/P39916 P39916]
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** [http://www.uniprot.org/uniprot/Q39242 Q39242]
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** [http://www.uniprot.org/uniprot/Q39243 Q39243]
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** [http://www.uniprot.org/uniprot/P38816 P38816]
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** [http://www.uniprot.org/uniprot/Q25861 Q25861]
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** [http://www.uniprot.org/uniprot/P29509 P29509]
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** [http://www.uniprot.org/uniprot/P52213 P52213]
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** [http://www.uniprot.org/uniprot/Q16881 Q16881]
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** [http://www.uniprot.org/uniprot/P75531 P75531]
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** [http://www.uniprot.org/uniprot/P74746 P74746]
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** [http://www.uniprot.org/uniprot/P46843 P46843]
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** [http://www.uniprot.org/uniprot/O54535 O54535]
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** [http://www.uniprot.org/uniprot/Q39951 Q39951]
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** [http://www.uniprot.org/uniprot/Q92375 Q92375]
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** [http://www.uniprot.org/uniprot/P52215 P52215]
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** [http://www.uniprot.org/uniprot/P51978 P51978]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=FAD-dependent pyridine nucleotide-disulphide oxidoreductase}}
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{{#set: common name=Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain}}
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{{#set: common name=Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain}}
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{{#set: ec number=EC-1.8.1.9}}
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{{#set: gene associated=Ec-19_001510|Ec-02_005330|Ec-19_004520}}
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{{#set: in pathway=THIOREDOX-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:55, 21 March 2018

Gene Ec-21_002920

  • left end position:
    • 3964445
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3978722
  • centisome position:
    • 53.7179
  • Synonym(s):
    • Esi_0387_0012
    • Esi0387_0012

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_002920&oldid=30256"