Difference between revisions of "RXN0-884"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16415 RXN-16415] == * direction: ** REVERSIBLE * common name: ** long chain acyl-coA synthetase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-884 RXN0-884] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxy-3-methylbut-2-enyl...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16415 RXN-16415] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-884 RXN0-884] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** long chain acyl-coA synthetase
+
** 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
−
** long chain acyl-CoA synthetase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.17.7.4 EC-1.17.7.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Very-long-chain-fatty-acids]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[VERY-LONG-CHAIN-FATTY-ACYL-COA]][c]
+
** 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''=>''' 1 [[CPD-4211]][c] '''+''' 1 [[WATER]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 a very-long-chain fatty acid[c] '''<=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 a very long chain fatty acyl-CoA[c]
+
** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''=>''' 1 dimethylallyl diphosphate[c] '''+''' 1 H2O[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-02_006430]]
+
* Gene: [[Ec-06_002680]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
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*** Assignment: EC-NUMBER
−
* [[Ec-12_008720]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-03_003710]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-01_001560]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* LIGAND-RXN:
−
{{#set: common name=long chain acyl-coA synthetase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R08210 R08210]
−
{{#set: common name=long chain acyl-CoA synthetase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07219 R07219]
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=Ec-02_006430|Ec-12_008720|Ec-03_003710|Ec-01_001560}}
+
{{#set: common name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-1.17.7.4}}
 +
{{#set: gene associated=Ec-06_002680}}
 +
{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:55, 21 March 2018

Reaction RXN0-884

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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