Difference between revisions of "Ec-13 003170"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE--TRNA-LIGASE-RXN METHIONINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Ec-13_003170 == * left end position: ** 4906017 * transcription direction: ** POSITIVE * right end position: ** 4931862 * centisome position: ** 70.7...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE--TRNA-LIGASE-RXN METHIONINE--TRNA-LIGASE-RXN] ==
+
== Gene Ec-13_003170 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 4906017
−
* common name:
+
* transcription direction:
−
** Methionyl-tRNA synthetase
+
** POSITIVE
−
** Nucleic acid-binding, OB-fold
+
* right end position:
−
* ec number:
+
** 4931862
−
** [http://enzyme.expasy.org/EC/6.1.1.10 EC-6.1.1.10]
+
* centisome position:
 +
** 70.729935   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0096_0059
 +
** Esi0096_0059
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN-11334]]
−
** 1 [[PROTON]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Elongation-tRNAMet]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-MET-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
−
* With common name(s):
+
−
** 1 H+[c] '''+''' 1 L-methionine[c] '''+''' 1 ATP[c] '''+''' 1 elongator tRNAmet[c] '''=>''' 1 AMP[c] '''+''' 1 an L-methionyl-[elongator tRNAmet][c] '''+''' 1 diphosphate[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-18_004570]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-16_002540]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=4906017}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13481 13481]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=4931862}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03659 R03659]
+
{{#set: centisome position=70.729935    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0096_0059|Esi0096_0059}}
−
** [http://www.uniprot.org/uniprot/P56127 P56127]
+
{{#set: reaction associated=RXN-11334}}
−
** [http://www.uniprot.org/uniprot/Q44951 Q44951]
+
−
** [http://www.uniprot.org/uniprot/P47267 P47267]
+
−
** [http://www.uniprot.org/uniprot/O84035 O84035]
+
−
** [http://www.uniprot.org/uniprot/O28819 O28819]
+
−
** [http://www.uniprot.org/uniprot/O58721 O58721]
+
−
** [http://www.uniprot.org/uniprot/O83776 O83776]
+
−
** [http://www.uniprot.org/uniprot/O33925 O33925]
+
−
** [http://www.uniprot.org/uniprot/Q58659 Q58659]
+
−
** [http://www.uniprot.org/uniprot/O66738 O66738]
+
−
** [http://www.uniprot.org/uniprot/Q9ZCP0 Q9ZCP0]
+
−
** [http://www.uniprot.org/uniprot/Q9PP85 Q9PP85]
+
−
** [http://www.uniprot.org/uniprot/O26687 O26687]
+
−
** [http://www.uniprot.org/uniprot/O67298 O67298]
+
−
** [http://www.uniprot.org/uniprot/Q9JWP0 Q9JWP0]
+
−
** [http://www.uniprot.org/uniprot/Q9ZKG9 Q9ZKG9]
+
−
** [http://www.uniprot.org/uniprot/Q9Z959 Q9Z959]
+
−
** [http://www.uniprot.org/uniprot/Q9CHE0 Q9CHE0]
+
−
** [http://www.uniprot.org/uniprot/P43828 P43828]
+
−
** [http://www.uniprot.org/uniprot/P56192 P56192]
+
−
** [http://www.uniprot.org/uniprot/Q50319 Q50319]
+
−
** [http://www.uniprot.org/uniprot/P23920 P23920]
+
−
** [http://www.uniprot.org/uniprot/P75091 P75091]
+
−
** [http://www.uniprot.org/uniprot/Q55729 Q55729]
+
−
** [http://www.uniprot.org/uniprot/P22438 P22438]
+
−
** [http://www.uniprot.org/uniprot/P00958 P00958]
+
−
** [http://www.uniprot.org/uniprot/P00959 P00959]
+
−
** [http://www.uniprot.org/uniprot/Q9M2T9 Q9M2T9]
+
−
** [http://www.uniprot.org/uniprot/O23761 O23761]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Methionyl-tRNA synthetase}}
+
−
{{#set: common name=Nucleic acid-binding, OB-fold}}
+
−
{{#set: ec number=EC-6.1.1.10}}
+
−
{{#set: gene associated=Ec-18_004570|Ec-16_002540}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:55, 21 March 2018

Gene Ec-13_003170

  • left end position:
    • 4906017
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4931862
  • centisome position:
    • 70.729935
  • Synonym(s):
    • Esi_0096_0059
    • Esi0096_0059

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-13_003170&oldid=30317"