Difference between revisions of "RXN-17472"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URATE-OXIDASE-RXN URATE-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** urate oxida...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17472 RXN-17472] == * direction: ** REVERSIBLE * common name: ** biotin synthase * Synonym(s):...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URATE-OXIDASE-RXN URATE-OXIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17472 RXN-17472] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
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** REVERSIBLE
 
* common name:
 
* common name:
−
** urate oxidase
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** biotin synthase
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* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.7.3.3 EC-1.7.3.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[URATE]][c] '''=>''' 1 [[5-HYDROXYISOURATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''<=>''' 1 [[CH33ADO]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[CPD-5662]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 oxygen[c] '''+''' 1 urate[c] '''=>''' 1 5-hydroxyisourate[c] '''+''' 1 hydrogen peroxide[c]
+
** 1 H+[c] '''+''' 1 dethiobiotin[c] '''+''' 1 a sulfurated [sulfur carrier][c] '''+''' 1 S-adenosyl-L-methionine[c] '''+''' 2 a reduced [2Fe-2S] ferredoxin[c] '''<=>''' 1 5'-deoxyadenosine[c] '''+''' 1 L-methionine[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 1 9-mercaptodethiobiotin[c] '''+''' 2 an oxidized [2Fe-2S] ferredoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-06_002470]]
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* Gene: [[Ec-24_000980]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
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***GO-TERM
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*** Assignment: GO-TERM
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** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5691]], urate degradation to allantoin I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5691 PWY-5691]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[annotation]]
−
** [[pantograph]]:
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** Source: [[annotation-esiliculosus_genome]]
−
*** [[aragem]]
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*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
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−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=REVERSIBLE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21368 21368]
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{{#set: common name=biotin synthase}}
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* LIGAND-RXN:
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{{#set: gene associated=Ec-24_000980}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02106 R02106]
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{{#set: in pathway=}}
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P04670 P04670]
+
−
** [http://www.uniprot.org/uniprot/P16163 P16163]
+
−
** [http://www.uniprot.org/uniprot/Q00511 Q00511]
+
−
** [http://www.uniprot.org/uniprot/P33282 P33282]
+
−
** [http://www.uniprot.org/uniprot/P25688 P25688]
+
−
** [http://www.uniprot.org/uniprot/P16164 P16164]
+
−
** [http://www.uniprot.org/uniprot/Q45697 Q45697]
+
−
** [http://www.uniprot.org/uniprot/P78609 P78609]
+
−
** [http://www.uniprot.org/uniprot/P09118 P09118]
+
−
** [http://www.uniprot.org/uniprot/P11645 P11645]
+
−
** [http://www.uniprot.org/uniprot/P23194 P23194]
+
−
** [http://www.uniprot.org/uniprot/P34799 P34799]
+
−
** [http://www.uniprot.org/uniprot/P34798 P34798]
+
−
** [http://www.uniprot.org/uniprot/P53763 P53763]
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−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=urate oxidase}}
+
−
{{#set: ec number=EC-1.7.3.3}}
+
−
{{#set: gene associated=Ec-06_002470}}
+
−
{{#set: in pathway=PWY-5691}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 20:56, 21 March 2018

Reaction RXN-17472

  • direction:
    • REVERSIBLE
  • common name:
    • biotin synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-17472&oldid=30350"