Difference between revisions of "HOMOCYSMETB12-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ALL-TRANS-HEXAPRENYL-DIPHOSPHATE ALL-TRANS-HEXAPRENYL-DIPHOSPHATE] == * smiles: ** CC(C)=CCCC(C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMETB12-RXN HOMOCYSMETB12-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Methionine...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ALL-TRANS-HEXAPRENYL-DIPHOSPHATE ALL-TRANS-HEXAPRENYL-DIPHOSPHATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMETB12-RXN HOMOCYSMETB12-RXN] ==
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* smiles:
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* direction:
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=NGFSMHKFTZROKJ-MMSZMYIBSA-K
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* common name:
 
* common name:
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** all-trans-hexaprenyl diphosphate
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** Methionine synthase
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* molecular weight:
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** Homocysteine S-methyltransferase
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** 583.66   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.13 EC-2.1.1.13]
 
* Synonym(s):
 
* Synonym(s):
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** hexaprenyl-diphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-9003]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[HOMO-CYS]][c] '''+''' 1 [[5-METHYL-THF-GLU-N]][c] '''=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[MET]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 L-homocysteine[c] '''+''' 1 an N5-methyl-tetrahydrofolate[c] '''=>''' 1 a tetrahydrofolate[c] '''+''' 1 L-methionine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_000970]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-06_000980]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine: [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSCAT-PWY ADENOSYLHOMOCYSCAT-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
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** '''12''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25246217 25246217]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11172 11172]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58179 58179]
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** [http://www.genome.jp/dbget-bin/www_bget?R00946 R00946]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C01230 C01230]
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** [http://www.uniprot.org/uniprot/Q57195 Q57195]
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* HMDB : HMDB12188
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** [http://www.uniprot.org/uniprot/Q9RVQ6 Q9RVQ6]
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]}}
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** [http://www.uniprot.org/uniprot/O33259 O33259]
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{{#set: inchi key=InChIKey=NGFSMHKFTZROKJ-MMSZMYIBSA-K}}
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** [http://www.uniprot.org/uniprot/Q55786 Q55786]
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{{#set: common name=all-trans-hexaprenyl diphosphate}}
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** [http://www.uniprot.org/uniprot/Q09582 Q09582]
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{{#set: molecular weight=583.66    }}
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** [http://www.uniprot.org/uniprot/Q9Z2Q4 Q9Z2Q4]
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{{#set: common name=hexaprenyl-diphosphate}}
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** [http://www.uniprot.org/uniprot/P13009 P13009]
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{{#set: consumed by=RXN-9003}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Methionine synthase}}
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{{#set: common name=Homocysteine S-methyltransferase}}
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{{#set: ec number=EC-2.1.1.13}}
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{{#set: gene associated=Ec-06_000970|Ec-06_000980}}
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{{#set: in pathway=PWY-3841|HOMOSER-METSYN-PWY|1CMET2-PWY|ADENOSYLHOMOCYSCAT-PWY|HSERMETANA-PWY|PWY-2201}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:56, 21 March 2018

Reaction HOMOCYSMETB12-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Methionine synthase
    • Homocysteine S-methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-homocysteine[c] + 1 an N5-methyl-tetrahydrofolate[c] => 1 a tetrahydrofolate[c] + 1 L-methionine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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