Difference between revisions of "HOMOCYSMETB12-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * common name: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMETB12-RXN HOMOCYSMETB12-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Methionine...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMETB12-RXN HOMOCYSMETB12-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** all-trans-retinol dehydrogenase (NAD)
+
** Methionine synthase
 +
** Homocysteine S-methyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.105 EC-1.1.1.105]
+
** [http://enzyme.expasy.org/EC/2.1.1.13 EC-2.1.1.13]
 
* Synonym(s):
 
* Synonym(s):
−
** all-trans retinol dehydrogenase
 
−
** retinal reductase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-13524]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[RETINAL]][c]
+
** 1 [[HOMO-CYS]][c] '''+''' 1 [[5-METHYL-THF-GLU-N]][c] '''=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[MET]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 all-trans-retinol[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 all-trans-retinal[c]
+
** 1 L-homocysteine[c] '''+''' 1 an N5-methyl-tetrahydrofolate[c] '''=>''' 1 a tetrahydrofolate[c] '''+''' 1 L-methionine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-16_001960]]
+
* Gene: [[Ec-06_000970]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-06_000980]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine: [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSCAT-PWY ADENOSYLHOMOCYSCAT-PWY]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 +
** '''12''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21284 21284]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11172 11172]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02124 R02124]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00946 R00946]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P50169 P50169]
+
** [http://www.uniprot.org/uniprot/Q57195 Q57195]
−
** [http://www.uniprot.org/uniprot/Q64437 Q64437]
+
** [http://www.uniprot.org/uniprot/Q9RVQ6 Q9RVQ6]
−
** [http://www.uniprot.org/uniprot/P40394 P40394]
+
** [http://www.uniprot.org/uniprot/O33259 O33259]
−
** [http://www.uniprot.org/uniprot/P50170 P50170]
+
** [http://www.uniprot.org/uniprot/Q55786 Q55786]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/Q09582 Q09582]
−
{{#set: common name=all-trans-retinol dehydrogenase (NAD)}}
+
** [http://www.uniprot.org/uniprot/Q9Z2Q4 Q9Z2Q4]
−
{{#set: ec number=EC-1.1.1.105}}
+
** [http://www.uniprot.org/uniprot/P13009 P13009]
−
{{#set: common name=all-trans retinol dehydrogenase|retinal reductase}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=Ec-16_001960}}
+
{{#set: common name=Methionine synthase}}
−
{{#set: in pathway=}}
+
{{#set: common name=Homocysteine S-methyltransferase}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-2.1.1.13}}
−
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: gene associated=Ec-06_000970|Ec-06_000980}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-3841|HOMOSER-METSYN-PWY|1CMET2-PWY|ADENOSYLHOMOCYSCAT-PWY|HSERMETANA-PWY|PWY-2201}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:56, 21 March 2018

Reaction HOMOCYSMETB12-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Methionine synthase
    • Homocysteine S-methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-homocysteine[c] + 1 an N5-methyl-tetrahydrofolate[c] => 1 a tetrahydrofolate[c] + 1 L-methionine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=HOMOCYSMETB12-RXN&oldid=30375"