Difference between revisions of "RXN-16082"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.15-RXN 2.7.7.15-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytidyltransferase-li...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16082 RXN-16082] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.15-RXN 2.7.7.15-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16082 RXN-16082] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Cytidyltransferase-like domain
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.7.15 EC-2.7.7.15]
+
** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[CDP-CHOLINE]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[MALONYL-COA]][c] '''+''' 1 [[CPD-14426]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-17332]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 phosphocholine[c] '''+''' 1 CTP[c] '''=>''' 1 CDP-choline[c] '''+''' 1 diphosphate[c]
+
** 1 malonyl-CoA[c] '''+''' 1 docosapentaenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 3-oxo-tetracosapentaenoyl-CoA[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-15_001610]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY4FS-2]], phosphatidylcholine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-2 PWY4FS-2]
+
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''14''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
+
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
−
* [[PWY-3561]], choline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3561 PWY-3561]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18997 18997]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01890 R01890]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P19836 P19836]
 
−
** [http://www.uniprot.org/uniprot/P49586 P49586]
 
−
** [http://www.uniprot.org/uniprot/P49584 P49584]
 
−
** [http://www.uniprot.org/uniprot/P49585 P49585]
 
−
** [http://www.uniprot.org/uniprot/P49587 P49587]
 
−
** [http://www.uniprot.org/uniprot/P93470 P93470]
 
−
** [http://www.uniprot.org/uniprot/Q42619 Q42619]
 
−
** [http://www.uniprot.org/uniprot/Q42620 Q42620]
 
−
** [http://www.uniprot.org/uniprot/Q42621 Q42621]
 
−
** [http://www.uniprot.org/uniprot/Q42622 Q42622]
 
−
** [http://www.uniprot.org/uniprot/P13259 P13259]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Cytidyltransferase-like domain}}
+
{{#set: ec number=EC-2.3.1}}
−
{{#set: ec number=EC-2.7.7.15}}
+
{{#set: in pathway=PWY-7606}}
−
{{#set: gene associated=Ec-15_001610}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: in pathway=PWY4FS-2|PWY-7782|PWY-3561|PWY3O-450}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:56, 21 March 2018

Reaction RXN-16082

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16082&oldid=30399"