Difference between revisions of "ADPREDUCT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16082 RXN-16082] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] == * direction: ** REVERSIBLE * common name: ** ADP reductase ** Ribon...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16082 RXN-16082] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADPREDUCT-RXN ADPREDUCT-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** ADP reductase
 +
** Ribonucleoside-diphosphate reductase small chain
 +
** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
 +
** EsV-1-128
 +
** EsV-1-180
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
+
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-14426]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17332]][c]
+
** 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[DADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[Red-Thioredoxin]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 docosapentaenoyl-CoA[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 coenzyme A[c] '''+''' 1 3-oxo-tetracosapentaenoyl-CoA[c]
+
** 1 an oxidized thioredoxin[c] '''+''' 1 dADP[c] '''+''' 1 H2O[c] '''<=>''' 1 ADP[c] '''+''' 1 a reduced thioredoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-21_002920]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-11_002180]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_005570]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-17_003700]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_000440]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-11_002170]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-06_005120]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
+
* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
−
** '''14''' reactions found over '''14''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: ec number=EC-2.3.1}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28034 28034]
−
{{#set: in pathway=PWY-7606}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=annotation}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02017 R02017]
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: common name=ADP reductase}}
 +
{{#set: common name=Ribonucleoside-diphosphate reductase small chain}}
 +
{{#set: common name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor}}
 +
{{#set: common name=EsV-1-128}}
 +
{{#set: common name=EsV-1-180}}
 +
{{#set: ec number=EC-1.17.4.1}}
 +
{{#set: gene associated=Ec-21_002920|Ec-11_002180|Ec-06_005570|Ec-17_003700|Ec-19_000440|Ec-11_002170|Ec-06_005120}}
 +
{{#set: in pathway=PWY-7220|PWY-7227}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:56, 21 March 2018

Reaction ADPREDUCT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ADP reductase
    • Ribonucleoside-diphosphate reductase small chain
    • ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
    • EsV-1-128
    • EsV-1-180
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized thioredoxin[c] + 1 dADP[c] + 1 H2O[c] <=> 1 ADP[c] + 1 a reduced thioredoxin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7220, adenosine deoxyribonucleotides de novo biosynthesis II: PWY-7220
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7227, adenosine deoxyribonucleotides de novo biosynthesis: PWY-7227
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links







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