Difference between revisions of "Ec-24 003550"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN3-RXN PYRIMSYN3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Gene == Gene Ec-24_003550 == * left end position: ** 3854575 * transcription direction: ** NEGATIVE * right end position: ** 3867197 * centisome position: ** 77.2...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN3-RXN PYRIMSYN3-RXN] ==
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== Gene Ec-24_003550 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3854575
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.7.4.7 EC-2.7.4.7]
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** NEGATIVE
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* right end position:
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** 3867197
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* centisome position:
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** 77.28204   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0034_0066
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** Esi0034_0066
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** TOP6B
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN]]
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** 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_006870]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6890]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6910]], hydroxymethylpyrimidine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6910 PWY-6910]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3854575}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19893 19893]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3867197}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04509 R04509]
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{{#set: centisome position=77.28204    }}
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* UNIPROT:
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{{#set: common name=Esi_0034_0066|Esi0034_0066|TOP6B}}
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** [http://www.uniprot.org/uniprot/Q9JTE1 Q9JTE1]
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{{#set: reaction associated=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PNL2 Q9PNL2]
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** [http://www.uniprot.org/uniprot/Q9CI79 Q9CI79]
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** [http://www.uniprot.org/uniprot/Q9CG47 Q9CG47]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.7.4.7}}
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{{#set: gene associated=Ec-06_006870}}
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{{#set: in pathway=PWY-7282|PWY-6890|PWY-6910|PWY-7356|PWY-7357}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:56, 21 March 2018

Gene Ec-24_003550

  • left end position:
    • 3854575
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3867197
  • centisome position:
    • 77.28204
  • Synonym(s):
    • Esi_0034_0066
    • Esi0034_0066
    • TOP6B

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_003550&oldid=30440"