Difference between revisions of "Ec-17 000510"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Gene == Gene Ec-17_000510 == * left end position: ** 448599 * transcription direction: ** NEGATIVE * right end position: ** 460754 * centisome position: ** 9.3498...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] ==
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== Gene Ec-17_000510 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 448599
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* common name:
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* transcription direction:
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** strictosidine synthase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.3.3.2 EC-4.3.3.2]
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** 460754
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* centisome position:
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** 9.349812   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0016_0169
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** Esi0016_0169
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** ASNRS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[6.3.5.6-RXN]]
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** 1 [[TRYPTAMINE]][c] '''+''' 1 [[SECOLOGANIN-CPD]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[STRICTOSIDINE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 tryptamine[c] '''+''' 1 secologanin[c] '''=>''' 1 H2O[c] '''+''' 1 strictosidine[c]
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== Pathways associated ==
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* [[PWY490-4]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-14_004550]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-00_009940]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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* [[PWY-5290]], secologanin and strictosidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6326]], camptothecin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=448599}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15013 15013]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=460754}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03738 R03738]
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{{#set: centisome position=9.349812    }}
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* UNIPROT:
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{{#set: common name=Esi_0016_0169|Esi0016_0169|ASNRS}}
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** [http://www.uniprot.org/uniprot/Q9VAQ9 Q9VAQ9]
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{{#set: reaction associated=6.3.5.6-RXN}}
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** [http://www.uniprot.org/uniprot/P68175 P68175]
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{{#set: pathway associated=PWY490-4}}
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** [http://www.uniprot.org/uniprot/P18417 P18417]
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** [http://www.uniprot.org/uniprot/P68174 P68174]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=strictosidine synthase}}
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{{#set: ec number=EC-4.3.3.2}}
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{{#set: gene associated=Ec-14_004550|Ec-00_009940}}
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{{#set: in pathway=PWY-5290|PWY-6326}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:56, 21 March 2018

Gene Ec-17_000510

  • left end position:
    • 448599
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 460754
  • centisome position:
    • 9.349812
  • Synonym(s):
    • Esi_0016_0169
    • Esi0016_0169
    • ASNRS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_000510&oldid=30446"