Difference between revisions of "PHOSPHORIBULOKINASE-RXN"

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(Created page with "Category:Gene == Gene Ec-18_004660 == * left end position: ** 4776470 * transcription direction: ** POSITIVE * right end position: ** 4836198 * centisome position: ** 96.9...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] == * direction: ** REVERSIBLE * common name: ** Ph...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-18_004660 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] ==
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* left end position:
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* direction:
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** 4776470
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** Phosphoribulokinase/uridine kinase
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* right end position:
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** P-loop containing nucleoside triphosphate hydrolase
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** 4836198
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.1.19 EC-2.7.1.19]
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** 96.953514   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0066_0108
 
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** Esi0066_0108
 
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** DYHC8
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ATPASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[ATP]][c] '''+''' 1 [[RIBULOSE-5P]][c] '''<=>''' 1 [[D-RIBULOSE-15-P2]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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***go-term
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* With common name(s):
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** 1 ATP[c] '''+''' 1 D-ribulose 5-phosphate[c] '''<=>''' 1 D-ribulose-1,5-bisphosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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* [[RXN-12195]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-27_003910]]
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***go-term
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-12196]]
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*** Assignment: EC-NUMBER
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** esiliculosus_genome
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** Source: [[orthology-aragem]]
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***go-term
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** Source: [[orthology-aragem]]
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* [[RXN0-5462]]
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* Gene: [[Ec-26_002450]]
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** esiliculosus_genome
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** Source: [[annotation-esiliculosus_genome]]
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***go-term
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways associated ==
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== Pathways  ==
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* [[PWY-7184]]
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* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
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* [[PWY-7198]]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6545]]
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* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
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* [[PWY-7210]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4776470}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19365 19365]
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{{#set: right end position=4836198}}
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* LIGAND-RXN:
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{{#set: centisome position=96.953514    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01523 R01523]
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{{#set: common name=Esi_0066_0108|Esi0066_0108|DYHC8}}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P23010 P23010]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/P0AEX5 P0AEX5]
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** [http://www.uniprot.org/uniprot/P19923 P19923]
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** [http://www.uniprot.org/uniprot/P19924 P19924]
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** [http://www.uniprot.org/uniprot/P23015 P23015]
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** [http://www.uniprot.org/uniprot/P12033 P12033]
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** [http://www.uniprot.org/uniprot/Q8GRU9 Q8GRU9]
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** [http://www.uniprot.org/uniprot/P09559 P09559]
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** [http://www.uniprot.org/uniprot/P25697 P25697]
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** [http://www.uniprot.org/uniprot/P93681 P93681]
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** [http://www.uniprot.org/uniprot/P19824 P19824]
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** [http://www.uniprot.org/uniprot/P27774 P27774]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphoribulokinase/uridine kinase}}
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{{#set: common name=P-loop containing nucleoside triphosphate hydrolase}}
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{{#set: ec number=EC-2.7.1.19}}
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{{#set: gene associated=Ec-27_003910|Ec-26_002450}}
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{{#set: in pathway=CALVIN-PWY|PWY-5723}}
 +
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:57, 21 March 2018

Reaction PHOSPHORIBULOKINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoribulokinase/uridine kinase
    • P-loop containing nucleoside triphosphate hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 D-ribulose 5-phosphate[c] <=> 1 D-ribulose-1,5-bisphosphate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-5723, Rubisco shunt: PWY-5723
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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