Difference between revisions of "UDPKIN-RXN"

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(Created page with "Category:Gene == Gene Ec-01_007830 == * left end position: ** 6677504 * transcription direction: ** NEGATIVE * right end position: ** 6681176 * centisome position: ** 64.7...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate ki...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-01_007830 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] ==
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* left end position:
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* direction:
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** 6677504
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** nucleoside diphosphate kinase
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* right end position:
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** Nucleoside diphosphate kinase
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** 6681176
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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** 64.71180   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0002_0108
 
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** Esi0002_0108
 
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** IPP transferase
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-4303]]
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* With identifiers:
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** [[pantograph]]-[[aragem]]
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** 1 [[UDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[UTP]][c] '''+''' 1 [[ADP]][c]
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* [[RXN-4305]]
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* With common name(s):
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** [[pantograph]]-[[aragem]]
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** 1 UDP[c] '''+''' 1 ATP[c] '''=>''' 1 UTP[c] '''+''' 1 ADP[c]
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* [[RXN0-6274]]
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** esiliculosus_genome
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Ec-07_000140]]
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* [[PWY-2681]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-2781]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-26_003930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_004330]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-04_001140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-22_003280]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-03_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_005170]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways ==
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* [[PWY-7176]], UTP and CTP de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6677504}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25098 25098]
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{{#set: right end position=6681176}}
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* LIGAND-RXN:
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{{#set: centisome position=64.71180    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00156 R00156]
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{{#set: common name=Esi_0002_0108|Esi0002_0108|IPP transferase}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-4303|RXN-4305|RXN0-6274}}
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{{#set: common name=nucleoside diphosphate kinase}}
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{{#set: pathway associated=PWY-2681|PWY-2781}}
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{{#set: common name=Nucleoside diphosphate kinase}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Ec-07_000140|Ec-26_003930|Ec-11_004330|Ec-04_001140|Ec-22_003280|Ec-03_001380|Ec-11_005170}}
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{{#set: in pathway=PWY-7176}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:57, 21 March 2018

Reaction UDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nucleoside diphosphate kinase
    • Nucleoside diphosphate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP[c] + 1 ATP[c] => 1 UTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7176, UTP and CTP de novo biosynthesis: PWY-7176
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=UDPKIN-RXN&oldid=30548"