Difference between revisions of "R147-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.101-RXN 2.4.1.101-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Alpha-1,3-mannosyl-...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R147-RXN R147-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1,2-dihydroxy-3-keto-5-methyl...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.101-RXN 2.4.1.101-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R147-RXN R147-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, family GT13
+
** 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
 
* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.101 EC-2.4.1.101]
+
** [http://enzyme.expasy.org/EC/1.13.11.54 EC-1.13.11.54]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[Mannosyl5-N-Glycans]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Mannosyl5-N-acetyl-glucosamine2-R]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-85]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-479]][c] '''+''' 1 [[FORMATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 UDP-N-acetyl-α-D-glucosamine[c] '''+''' 1 a (mannosyl)5-N-glycan[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 a (mannosyl)5-(N-acetylglucosaminyl)-N-glycan[c]
+
** 1 oxygen[c] '''+''' 1 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one[c] '''=>''' 1 H+[c] '''+''' 1 2-oxo-4-methylthiobutanoate[c] '''+''' 1 formate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-23_001370]]
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* Gene: [[Ec-20_000070]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Ec-08_002720]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7426]], mannosyl-glycoprotein N-acetylglucosaminyltransferases: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7426 PWY-7426]
+
* [[PWY-4361]], S-methyl-5-thio-α-D-ribose 1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4361 PWY-4361]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11456 11456]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24504 24504]
−
* UNIPROT:
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P27115 P27115]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07364 R07364]
−
** [http://www.uniprot.org/uniprot/P27808 P27808]
+
−
** [http://www.uniprot.org/uniprot/Q09325 Q09325]
+
−
** [http://www.uniprot.org/uniprot/Q9XGM8 Q9XGM8]
+
−
** [http://www.uniprot.org/uniprot/Q21450 Q21450]
+
−
** [http://www.uniprot.org/uniprot/Q11068 Q11068]
+
−
** [http://www.uniprot.org/uniprot/Q9GPA3 Q9GPA3]
+
−
** [http://www.uniprot.org/uniprot/P26572 P26572]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, family GT13}}
+
{{#set: common name=1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase}}
−
{{#set: ec number=EC-2.4.1.101}}
+
{{#set: ec number=EC-1.13.11.54}}
−
{{#set: gene associated=Ec-23_001370|Ec-08_002720}}
+
{{#set: gene associated=Ec-20_000070}}
−
{{#set: in pathway=PWY-7426}}
+
{{#set: in pathway=PWY-4361}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:57, 21 March 2018

Reaction R147-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one[c] => 1 H+[c] + 1 2-oxo-4-methylthiobutanoate[c] + 1 formate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4361, S-methyl-5-thio-α-D-ribose 1-phosphate degradation: PWY-4361
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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