Difference between revisions of "RXN66-477"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14228 RXN-14228] == * direction: ** REVERSIBLE * common name: ** nucleoside diphosphate kinase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-477 RXN66-477] == * direction: ** LEFT-TO-RIGHT * common name: ** straight chain fatty acyl-C...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14228 RXN-14228] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-477 RXN66-477] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** nucleoside diphosphate kinase
+
** straight chain fatty acyl-CoA ligase
−
** Nucleoside diphosphate kinase
+
** long chain acyl-coA synthetase
 +
** long chain acyl-CoA synthetase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD0-2231]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[DITP]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[Odd-Straight-Chain-234-Sat-FA]][c] '''=>''' 1 [[Odd-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 dIDP[c] '''+''' 1 ATP[c] '''<=>''' 1 ADP[c] '''+''' 1 dITP[c]
+
** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 an odd numbered straight chain 2,3,4-saturated fatty acid[c] '''=>''' 1 an odd numbered straight chain 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-11_004330]]
+
* Gene: [[Ec-01_001560]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** Source: [[orthology-aragem]]
+
* Gene: [[Ec-03_003710]]
−
* Gene: [[Ec-03_001380]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-26_003930]]
+
* Gene: [[Ec-12_008720]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-04_001140]]
+
* Gene: [[Ec-02_006430]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** Source: [[orthology-aragem]]
+
−
* Gene: [[Ec-07_000140]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-11_005170]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-22_003280]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY66-388]], fatty acid &alpha;-oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-388 PWY66-388]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30942 30942]
+
{{#set: common name=straight chain fatty acyl-CoA ligase}}
−
* LIGAND-RXN:
+
{{#set: common name=long chain acyl-coA synthetase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03530 R03530]
+
{{#set: common name=long chain acyl-CoA synthetase}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: ec number=EC-6.2.1.3}}
−
{{#set: common name=nucleoside diphosphate kinase}}
+
{{#set: gene associated=Ec-01_001560|Ec-03_003710|Ec-12_008720|Ec-02_006430}}
−
{{#set: common name=Nucleoside diphosphate kinase}}
+
{{#set: in pathway=PWY66-388}}
−
{{#set: ec number=EC-2.7.4.6}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: gene associated=Ec-11_004330|Ec-03_001380|Ec-26_003930|Ec-04_001140|Ec-07_000140|Ec-11_005170|Ec-22_003280}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:57, 21 March 2018

Reaction RXN66-477

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • straight chain fatty acyl-CoA ligase
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-388, fatty acid α-oxidation III: PWY66-388
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN66-477&oldid=30568"