Difference between revisions of "Ec-17 004310"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.3-RXN 5.99.1.3-RXN] == * direction: ** REVERSIBLE * common name: ** DNA gyrase/topoisomerase...")
 
(Created page with "Category:Gene == Gene Ec-17_004310 == * left end position: ** 4692465 * transcription direction: ** NEGATIVE * right end position: ** 4695830 * centisome position: ** 97.8...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.3-RXN 5.99.1.3-RXN] ==
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== Gene Ec-17_004310 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 4692465
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* common name:
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* transcription direction:
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** DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
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** NEGATIVE
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** DNA topoisomerase II, eukaryotic-type
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* right end position:
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** Spo11/DNA topoisomerase VI subunit A
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** 4695830
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** DNA topoisomerase type II (ATP-hydrolyzing)
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* centisome position:
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* ec number:
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** 97.80152   
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** [http://enzyme.expasy.org/EC/5.99.1.3 EC-5.99.1.3]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0353_0017
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** Esi0353_0017
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[AGMATIN-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[Double-Stranded-DNAs]][c] '''<=>''' 1 [[Negatively-super-coiled-DNAs]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ATP[c] '''+''' 1 a double stranded DNA[c] '''<=>''' 1 a negatively supercoiled DNA[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c]
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== Pathways associated ==
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* [[PWY-6305]]
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== Genes associated with this reaction  ==
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* [[PWY0-823]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-40]]
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* [[Ec-08_001460]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-23_001820]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-03_004560]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-15_001600]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-21_001490]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-24_003570]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=4692465}}
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** [http://www.uniprot.org/uniprot/Q7M3G2 Q7M3G2]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/Q02880 Q02880]
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{{#set: right end position=4695830}}
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** [http://www.uniprot.org/uniprot/P0A0K8 P0A0K8]
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{{#set: centisome position=97.80152    }}
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** [http://www.uniprot.org/uniprot/P41515 P41515]
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{{#set: common name=Esi_0353_0017|Esi0353_0017}}
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** [http://www.uniprot.org/uniprot/P12531 P12531]
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{{#set: reaction associated=AGMATIN-RXN}}
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** [http://www.uniprot.org/uniprot/P27570 P27570]
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{{#set: pathway associated=PWY-6305|PWY0-823|PWY-40}}
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** [http://www.uniprot.org/uniprot/Q03470 Q03470]
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** [http://www.uniprot.org/uniprot/P35810 P35810]
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** [http://www.uniprot.org/uniprot/P43701 P43701]
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** [http://www.uniprot.org/uniprot/Q9JX55 Q9JX55]
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** [http://www.uniprot.org/uniprot/Q9CH36 Q9CH36]
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** [http://www.uniprot.org/uniprot/P20831 P20831]
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** [http://www.uniprot.org/uniprot/Q9JTW5 Q9JTW5]
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** [http://www.uniprot.org/uniprot/P33769 P33769]
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** [http://www.uniprot.org/uniprot/P47250 P47250]
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** [http://www.uniprot.org/uniprot/Q59189 Q59189]
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** [http://www.uniprot.org/uniprot/P05652 P05652]
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** [http://www.uniprot.org/uniprot/P43700 P43700]
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** [http://www.uniprot.org/uniprot/P05653 P05653]
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** [http://www.uniprot.org/uniprot/O87667 O87667]
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** [http://www.uniprot.org/uniprot/Q9CGI5 Q9CGI5]
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** [http://www.uniprot.org/uniprot/P23992 P23992]
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** [http://www.uniprot.org/uniprot/P09176 P09176]
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** [http://www.uniprot.org/uniprot/P06786 P06786]
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** [http://www.uniprot.org/uniprot/P0AES6 P0AES6]
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** [http://www.uniprot.org/uniprot/Q00942 Q00942]
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** [http://www.uniprot.org/uniprot/P22447 P22447]
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** [http://www.uniprot.org/uniprot/P08096 P08096]
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** [http://www.uniprot.org/uniprot/P07065 P07065]
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** [http://www.uniprot.org/uniprot/P0AES4 P0AES4]
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** [http://www.uniprot.org/uniprot/P14829 P14829]
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** [http://www.uniprot.org/uniprot/P77993 P77993]
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** [http://www.uniprot.org/uniprot/P22840 P22840]
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** [http://www.uniprot.org/uniprot/Q01320 Q01320]
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** [http://www.uniprot.org/uniprot/P15348 P15348]
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** [http://www.uniprot.org/uniprot/P13364 P13364]
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** [http://www.uniprot.org/uniprot/P34203 P34203]
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** [http://www.uniprot.org/uniprot/P50074 P50074]
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** [http://www.uniprot.org/uniprot/P34031 P34031]
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** [http://www.uniprot.org/uniprot/Q50404 Q50404]
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** [http://www.uniprot.org/uniprot/Q50405 Q50405]
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** [http://www.uniprot.org/uniprot/Q50406 Q50406]
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** [http://www.uniprot.org/uniprot/P41513 P41513]
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** [http://www.uniprot.org/uniprot/Q43906 Q43906]
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** [http://www.uniprot.org/uniprot/P30182 P30182]
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** [http://www.uniprot.org/uniprot/P37411 P37411]
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** [http://www.uniprot.org/uniprot/P0A0L0 P0A0L0]
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** [http://www.uniprot.org/uniprot/Q50435 Q50435]
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** [http://www.uniprot.org/uniprot/P22446 P22446]
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** [http://www.uniprot.org/uniprot/P77966 P77966]
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** [http://www.uniprot.org/uniprot/Q48974 Q48974]
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** [http://www.uniprot.org/uniprot/Q48995 Q48995]
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** [http://www.uniprot.org/uniprot/Q49017 Q49017]
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** [http://www.uniprot.org/uniprot/O68071 O68071]
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** [http://www.uniprot.org/uniprot/O68140 O68140]
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** [http://www.uniprot.org/uniprot/O24308 O24308]
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** [http://www.uniprot.org/uniprot/Q57532 Q57532]
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** [http://www.uniprot.org/uniprot/O41065 O41065]
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** [http://www.uniprot.org/uniprot/Q9ZNN5 Q9ZNN5]
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** [http://www.uniprot.org/uniprot/Q9ZNN4 Q9ZNN4]
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** [http://www.uniprot.org/uniprot/Q9ZNN3 Q9ZNN3]
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** [http://www.uniprot.org/uniprot/Q9ZNN2 Q9ZNN2]
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** [http://www.uniprot.org/uniprot/Q9ZNN1 Q9ZNN1]
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** [http://www.uniprot.org/uniprot/Q9ZNN0 Q9ZNN0]
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** [http://www.uniprot.org/uniprot/O87117 O87117]
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** [http://www.uniprot.org/uniprot/Q9WXF4 Q9WXF4]
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** [http://www.uniprot.org/uniprot/O50627 O50627]
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** [http://www.uniprot.org/uniprot/O50628 O50628]
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** [http://www.uniprot.org/uniprot/P94604 P94604]
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** [http://www.uniprot.org/uniprot/P94605 P94605]
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** [http://www.uniprot.org/uniprot/Q9S5H9 Q9S5H9]
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** [http://www.uniprot.org/uniprot/Q9ZNH3 Q9ZNH3]
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−
** [http://www.uniprot.org/uniprot/Q9ZNH2 Q9ZNH2]
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−
{{#set: direction=REVERSIBLE}}
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{{#set: common name=DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel}}
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{{#set: common name=DNA topoisomerase II, eukaryotic-type}}
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{{#set: common name=Spo11/DNA topoisomerase VI subunit A}}
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{{#set: common name=DNA topoisomerase type II (ATP-hydrolyzing)}}
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{{#set: ec number=EC-5.99.1.3}}
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{{#set: gene associated=Ec-08_001460|Ec-23_001820|Ec-03_004560|Ec-15_001600|Ec-21_001490|Ec-24_003570}}
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{{#set: in pathway=}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:57, 21 March 2018

Gene Ec-17_004310

  • left end position:
    • 4692465
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4695830
  • centisome position:
    • 97.80152
  • Synonym(s):
    • Esi_0353_0017
    • Esi0353_0017

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_004310&oldid=30579"