Difference between revisions of "RXN-15271"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DAMP DAMP] == * smiles: ** C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O * inchi...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15271 RXN-15271] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DAMP DAMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15271 RXN-15271] ==
* smiles:
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* direction:
** C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O
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** LEFT-TO-RIGHT
* inchi key:
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* ec number:
** InChIKey=KHWCHTKSEGGWEX-RRKCRQDMSA-L
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** [http://enzyme.expasy.org/EC/2.4.99.1 EC-2.4.99.1]
* common name:
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** dAMP
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* molecular weight:
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** 329.208   
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* Synonym(s):
 
* Synonym(s):
** 2'-deoxyadenosine 5'-phosphate
 
** deoxyadenosine-phosphate
 
** 2'-deoxyadenosine 5''-monophosphate
 
** 2'-dAMP
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
== Reaction(s) known to produce the compound ==
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* With identifiers:
* [[RXN-14195]]
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** 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[CMP-N-ACETYL-NEURAMINATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[CPD-16483]][c]
== Reaction(s) of unknown directionality ==
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* With common name(s):
* [[RXN-14215]]
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** 1 β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c] '''+''' 1 CMP-N-acetyl-β-neuraminate[c] '''=>''' 1 H+[c] '''+''' 1 CMP[c] '''+''' 1 α-N-acetylneuraminyl-2,6-β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c]
 +
 
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[PWY-7434]], terminal O-glycans residues modification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* CAS : 653-63-4
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{{#set: direction=LEFT-TO-RIGHT}}
* BIGG : 34735
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{{#set: ec number=EC-2.4.99.1}}
* PUBCHEM:
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{{#set: in pathway=PWY-7434}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=22848660 22848660]
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{{#set: reconstruction category=annotation}}
* HMDB : HMDB00905
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
* LIGAND-CPD:
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{{#set: reconstruction tool=pathwaytools}}
** [http://www.genome.jp/dbget-bin/www_bget?C00360 C00360]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.18735032.html 18735032]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58245 58245]
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* METABOLIGHTS : MTBLC58245
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{{#set: smiles=C(C3(C(CC(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O))OP([O-])([O-])=O}}
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{{#set: inchi key=InChIKey=KHWCHTKSEGGWEX-RRKCRQDMSA-L}}
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{{#set: common name=dAMP}}
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{{#set: molecular weight=329.208    }}
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{{#set: common name=2'-deoxyadenosine 5'-phosphate|deoxyadenosine-phosphate|2'-deoxyadenosine 5''-monophosphate|2'-dAMP}}
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{{#set: produced by=RXN-14195}}
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{{#set: consumed or produced by=RXN-14215}}
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Latest revision as of 19:58, 21 March 2018

Reaction RXN-15271

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c] + 1 CMP-N-acetyl-β-neuraminate[c] => 1 H+[c] + 1 CMP[c] + 1 α-N-acetylneuraminyl-2,6-β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c]

Genes associated with this reaction

Pathways

  • PWY-7434, terminal O-glycans residues modification: PWY-7434
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links