Difference between revisions of "SHIKIMATE-5-DEHYDROGENASE-RXN"

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(Created page with "Category:Gene == Gene Ec-16_001550 == * left end position: ** 1757528 * transcription direction: ** POSITIVE * right end position: ** 1762175 * centisome position: ** 32.9...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5-DEHYDROGENASE-RXN SHIKIMATE-5-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-16_001550 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5-DEHYDROGENASE-RXN SHIKIMATE-5-DEHYDROGENASE-RXN] ==
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* left end position:
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* direction:
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** 1757528
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** shikimate 3-dehydrogenase (NADP+)
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* right end position:
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* ec number:
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** 1762175
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** [http://enzyme.expasy.org/EC/1.1.1.25 EC-1.1.1.25]
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* centisome position:
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** 32.926975   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0488_0013
 
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** Esi0488_0013
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[2.7.11.4-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[SHIKIMATE]][c] '''+''' 1 [[NADP]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 3-dehydroshikimate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 shikimate[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-02_006010]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1757528}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17737 17737]
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{{#set: right end position=1762175}}
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* LIGAND-RXN:
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{{#set: centisome position=32.926975    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02413 R02413]
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{{#set: common name=Esi_0488_0013|Esi0488_0013}}
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* UNIPROT:
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{{#set: reaction associated=2.7.11.4-RXN}}
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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** [http://www.uniprot.org/uniprot/Q58484 Q58484]
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** [http://www.uniprot.org/uniprot/Q9PIA0 Q9PIA0]
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** [http://www.uniprot.org/uniprot/P0A6D5 P0A6D5]
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** [http://www.uniprot.org/uniprot/Q9CES7 Q9CES7]
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** [http://www.uniprot.org/uniprot/Q44606 Q44606]
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** [http://www.uniprot.org/uniprot/Q44608 Q44608]
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** [http://www.uniprot.org/uniprot/Q44609 Q44609]
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** [http://www.uniprot.org/uniprot/Q44610 Q44610]
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** [http://www.uniprot.org/uniprot/Q44611 Q44611]
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** [http://www.uniprot.org/uniprot/Q44612 Q44612]
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** [http://www.uniprot.org/uniprot/P15770 P15770]
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** [http://www.uniprot.org/uniprot/Q42947 Q42947]
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** [http://www.uniprot.org/uniprot/O65917 O65917]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=shikimate 3-dehydrogenase (NADP+)}}
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{{#set: ec number=EC-1.1.1.25}}
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{{#set: gene associated=Ec-02_006010}}
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{{#set: in pathway=PWY-6163}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:58, 21 March 2018

Reaction SHIKIMATE-5-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • shikimate 3-dehydrogenase (NADP+)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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