Difference between revisions of "Ec-21 001700"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONDEHYDROG-RXN 6PGLUCONDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosp...")
(Created page with "Category:Gene == Gene Ec-21_001700 == * left end position: ** 2761888 * transcription direction: ** NEGATIVE * right end position: ** 2764982 * centisome position: ** 37.4...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONDEHYDROG-RXN 6PGLUCONDEHYDROG-RXN] ==
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== Gene Ec-21_001700 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2761888
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* common name:
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* transcription direction:
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** phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]
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** NEGATIVE
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** phosphogluconate dehydrogenase (decarboxylating)
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* right end position:
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* ec number:
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** 2764982
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** [http://enzyme.expasy.org/EC/1.1.1.351 EC-1.1.1.351]
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* centisome position:
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** 37.423355   
 
* Synonym(s):
 
* Synonym(s):
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** 6PGD
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** Esi_0147_0026
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** 6-phosphogluconic carboxylase
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** Esi0147_0026
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** 6-phosphogluconic dehydrogenase
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** PTP
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** Phosphogluconic acid dehydrogenase
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.3.16-RXN]]
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** 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-2961]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[RIBULOSE-5P]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 NAD(P)+[c] '''+''' 1 D-gluconate 6-phosphate[c] '''=>''' 1 CO2[c] '''+''' 1 NAD(P)H[c] '''+''' 1 D-ribulose 5-phosphate[c]
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* Reaction: [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_008450]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-12_007690]]
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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** '''13''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2761888}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=2764982}}
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** [http://www.uniprot.org/uniprot/P14332 P14332]
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{{#set: centisome position=37.423355    }}
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** [http://www.uniprot.org/uniprot/P31072 P31072]
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{{#set: common name=Esi_0147_0026|Esi0147_0026|PTP}}
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** [http://www.uniprot.org/uniprot/Q9CDN4 Q9CDN4]
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{{#set: reaction associated=3.1.3.16-RXN|PROTEIN-TYROSINE-PHOSPHATASE-RXN}}
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** [http://www.uniprot.org/uniprot/P47506 P47506]
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** [http://www.uniprot.org/uniprot/Q9JWS3 Q9JWS3]
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** [http://www.uniprot.org/uniprot/P43774 P43774]
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** [http://www.uniprot.org/uniprot/P12013 P12013]
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** [http://www.uniprot.org/uniprot/P41576 P41576]
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** [http://www.uniprot.org/uniprot/P00350 P00350]
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** [http://www.uniprot.org/uniprot/P00349 P00349]
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** [http://www.uniprot.org/uniprot/P52209 P52209]
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** [http://www.uniprot.org/uniprot/P41581 P41581]
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** [http://www.uniprot.org/uniprot/P41582 P41582]
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** [http://www.uniprot.org/uniprot/Q59275 Q59275]
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** [http://www.uniprot.org/uniprot/P41583 P41583]
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** [http://www.uniprot.org/uniprot/Q60254 Q60254]
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** [http://www.uniprot.org/uniprot/P37754 P37754]
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** [http://www.uniprot.org/uniprot/Q59410 Q59410]
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** [http://www.uniprot.org/uniprot/P52207 P52207]
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** [http://www.uniprot.org/uniprot/P70718 P70718]
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** [http://www.uniprot.org/uniprot/Q7M451 Q7M451]
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** [http://www.uniprot.org/uniprot/P41572 P41572]
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** [http://www.uniprot.org/uniprot/P14062 P14062]
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** [http://www.uniprot.org/uniprot/P21577 P21577]
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** [http://www.uniprot.org/uniprot/P38720 P38720]
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** [http://www.uniprot.org/uniprot/Q40311 Q40311]
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** [http://www.uniprot.org/uniprot/P53319 P53319]
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** [http://www.uniprot.org/uniprot/O81237 O81237]
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** [http://www.uniprot.org/uniprot/O81238 O81238]
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** [http://www.uniprot.org/uniprot/O81239 O81239]
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** [http://www.uniprot.org/uniprot/O22111 O22111]
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** [http://www.uniprot.org/uniprot/Q17761 Q17761]
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** [http://www.uniprot.org/uniprot/O32911 O32911]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]}}
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{{#set: common name=phosphogluconate dehydrogenase (decarboxylating)}}
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{{#set: ec number=EC-1.1.1.351}}
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{{#set: common name=6PGD|6-phosphogluconic carboxylase|6-phosphogluconic dehydrogenase|Phosphogluconic acid dehydrogenase}}
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{{#set: gene associated=Ec-01_008450|Ec-12_007690}}
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{{#set: in pathway=P122-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:58, 21 March 2018

Gene Ec-21_001700

  • left end position:
    • 2761888
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2764982
  • centisome position:
    • 37.423355
  • Synonym(s):
    • Esi_0147_0026
    • Esi0147_0026
    • PTP

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_001700&oldid=30669"