Difference between revisions of "CHITOBIOSE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERVAL-RXN BRANCHED-CHAINAMINOTRANSFERVAL-RXN] == * direction: ** REVERSIBL...")
 
(Created page with "Category:Gene == Gene Ec-27_004040 == * left end position: ** 3523577 * transcription direction: ** POSITIVE * right end position: ** 3531491 * centisome position: ** 54.6...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERVAL-RXN BRANCHED-CHAINAMINOTRANSFERVAL-RXN] ==
+
== Gene Ec-27_004040 ==
−
* direction:
+
* left end position:
−
** REVERSIBLE
+
** 3523577
−
* common name:
+
* transcription direction:
−
** branched-chain-amino-acid transaminase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
+
** 3531491
 +
* centisome position:
 +
** 54.629887   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0000_0446
 +
** Esi0000_0446
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[DIOHBUTANONEPSYN-RXN]]
−
** 1 [[VAL]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[GLT]][c]
+
** esiliculosus_genome
−
* With common name(s):
+
***go-term
−
** 1 L-valine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 L-glutamate[c]
+
* [[GTP-CYCLOHYDRO-II-RXN]]
−
 
+
** [[pantograph]]-[[aragem]]
−
== Genes associated with this reaction  ==
+
== Pathways associated ==
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[PWY-7539]]
−
* [[Ec-20_001390]]
+
* [[PWY-6167]]
−
** ESILICULOSUS_GENOME
+
* [[PWY-6168]]
−
***GO-TERM
+
* [[RIBOSYN2-PWY]]
−
* [[Ec-12_005530]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-12_005520]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-12_005560]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways ==
+
−
* [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
+
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
−
* [[ALANINE-VALINESYN-PWY]], L-alanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=ALANINE-VALINESYN-PWY ALANINE-VALINESYN-PWY]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-5057]], L-valine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=3523577}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24813 24813]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=3531491}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01214 R01214]
+
{{#set: centisome position=54.629887    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0000_0446|Esi0000_0446}}
−
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
+
{{#set: reaction associated=DIOHBUTANONEPSYN-RXN|GTP-CYCLOHYDRO-II-RXN}}
−
** [http://www.uniprot.org/uniprot/P38891 P38891]
+
{{#set: pathway associated=PWY-7539|PWY-6167|PWY-6168|RIBOSYN2-PWY}}
−
** [http://www.uniprot.org/uniprot/P47176 P47176]
+
−
** [http://www.uniprot.org/uniprot/O86505 O86505]
+
−
** [http://www.uniprot.org/uniprot/O14370 O14370]
+
−
** [http://www.uniprot.org/uniprot/O32954 O32954]
+
−
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=branched-chain-amino-acid transaminase}}
+
−
{{#set: ec number=EC-2.6.1.42}}
+
−
{{#set: gene associated=Ec-20_001390|Ec-12_005530|Ec-12_005520|Ec-12_005560}}
+
−
{{#set: in pathway=VALSYN-PWY|VALDEG-PWY|ALANINE-VALINESYN-PWY|PWY-5057}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 20:22, 17 March 2018

Gene Ec-27_004040

  • left end position:
    • 3523577
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3531491
  • centisome position:
    • 54.629887
  • Synonym(s):
    • Esi_0000_0446
    • Esi0000_0446

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CHITOBIOSE&oldid=8634"