Difference between revisions of "HS"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P)-binding domain * ec nu...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** DNA photolyase
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** NAD(P)-binding domain
−
** deoxyribodipyrimidine photo-lyase
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* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3]
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** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DNA-With-Pyrimidine-Dimers]][c] '''=>''' 1 [[DNA-Adjacent-Pyrimidines]][c]
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** 1 [[NADPH]][c] '''+''' 1 [[CPD-7087]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-7088]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
**
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** 1 NADPH[c] '''+''' 1 (+)-dihydromyricetin[c] '''+''' 2 H+[c] '''=>''' 1 (2R,3S,4S)-leucodelphinidin[c] '''+''' 1 NADP+[c]
 +
 
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-01_008100]]
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* [[Ec-12_001350]]
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** ESILICULOSUS_GENOME
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** [[pantograph]]-[[aragem]]
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***GO-TERM
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* [[Ec-12_005240]]
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* [[Ec-10_005990]]
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** [[pantograph]]-[[aragem]]
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** ESILICULOSUS_GENOME
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* [[Ec-23_001220]]
−
***GO-TERM
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−
* [[Ec-16_001260]]
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−
** ESILICULOSUS_GENOME
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−
***GO-TERM
+
−
* [[Ec-01_008080]]
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** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***GO-TERM
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***EC-NUMBER
 +
** [[pantograph]]-[[aragem]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5152]], leucodelphinidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5152 PWY-5152]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
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* Category: [[orthology]]
−
** [[pathwaytools]]:
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** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
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*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05038 R05038]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P12769 P12769]
+
−
** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
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−
** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
+
−
** [http://www.uniprot.org/uniprot/P12768 P12768]
+
−
** [http://www.uniprot.org/uniprot/P27526 P27526]
+
−
** [http://www.uniprot.org/uniprot/P25078 P25078]
+
−
** [http://www.uniprot.org/uniprot/Q43125 Q43125]
+
−
** [http://www.uniprot.org/uniprot/P40115 P40115]
+
−
** [http://www.uniprot.org/uniprot/Q28811 Q28811]
+
−
** [http://www.uniprot.org/uniprot/Q24443 Q24443]
+
−
** [http://www.uniprot.org/uniprot/Q91186 Q91186]
+
−
** [http://www.uniprot.org/uniprot/Q42696 Q42696]
+
−
** [http://www.uniprot.org/uniprot/P05066 P05066]
+
−
** [http://www.uniprot.org/uniprot/O24020 O24020]
+
−
** [http://www.uniprot.org/uniprot/O24374 O24374]
+
−
** [http://www.uniprot.org/uniprot/P00914 P00914]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=DNA photolyase}}
+
{{#set: common name=NAD(P)-binding domain}}
−
{{#set: common name=deoxyribodipyrimidine photo-lyase}}
+
{{#set: ec number=EC-1.1.1.219}}
−
{{#set: ec number=EC-4.1.99.3}}
+
{{#set: gene associated=Ec-12_001350|Ec-12_005240|Ec-23_001220}}
−
{{#set: gene associated=Ec-01_008100|Ec-10_005990|Ec-16_001260|Ec-01_008080}}
+
{{#set: in pathway=PWY-5152}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:27, 17 March 2018

Reaction RXN-7784

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 (+)-dihydromyricetin[c] + 2 H+[c] => 1 (2R,3S,4S)-leucodelphinidin[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5152, leucodelphinidin biosynthesis: PWY-5152
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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