Difference between revisions of "Ec-28 003190"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-902 RXN-902] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain ** B...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** uroporphyrino...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-902 RXN-902] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ClpP/crotonase-like domain
+
** uroporphyrinogen synthase, putative chloroplast precursor
−
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
+
−
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/4.2.1.75 EC-4.2.1.75]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[E-PHENYLITACONYL-COA]][c] '''=>''' 1 [[CARBOXYMETHYL-HYDROXYPHENYLPROPCOA]][c]
+
** 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[UROPORPHYRINOGEN-III]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 (E)-2-benzylidenesuccinyl-CoA[c] '''=>''' 1 2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA[c]
+
** 1 preuroporphyrinogen[c] '''=>''' 1 uroporphyrinogen-III[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-16_003560]]
+
* [[Ec-12_004890]]
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-06_001380]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-14_006530]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-16_001250]]
+
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-81]], toluene degradation to benzoyl-CoA (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-81 PWY-81]
+
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05599 R05599]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P10746 P10746]
 +
** [http://www.uniprot.org/uniprot/P51163 P51163]
 +
** [http://www.uniprot.org/uniprot/P21248 P21248]
 +
** [http://www.uniprot.org/uniprot/Q58401 Q58401]
 +
** [http://www.uniprot.org/uniprot/P09126 P09126]
 +
** [http://www.uniprot.org/uniprot/Q59294 Q59294]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ClpP/crotonase-like domain}}
+
{{#set: common name=uroporphyrinogen synthase, putative chloroplast precursor}}
−
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
+
{{#set: ec number=EC-4.2.1.75}}
−
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
+
{{#set: gene associated=Ec-12_004890}}
−
{{#set: ec number=EC-4.2.1.17}}
+
{{#set: in pathway=PWY-5189|PWY-5188}}
−
{{#set: gene associated=Ec-16_003560|Ec-06_001380|Ec-14_006530|Ec-16_001250}}
+
−
{{#set: in pathway=PWY-81}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:32, 17 March 2018

Reaction UROGENIIISYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • uroporphyrinogen synthase, putative chloroplast precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5189, tetrapyrrole biosynthesis II (from glycine): PWY-5189
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate): PWY-5188
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-28_003190&oldid=9342"