Difference between revisions of "PWY-7383"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acetylglucosaminylt...")
 
(Created page with "Category:Gene == Gene Ec-11_001230 == * left end position: ** 1270249 * transcription direction: ** NEGATIVE * right end position: ** 1279057 * centisome position: ** 20.1...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.223-RXN 2.4.1.223-RXN] ==
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== Gene Ec-11_001230 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1270249
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* common name:
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* transcription direction:
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** acetylglucosaminyltransferase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.1.223 EC-2.4.1.223]
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** 1279057
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* centisome position:
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** 20.195835   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0119_0024
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** Esi0119_0024
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-12086]]
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** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[GlcA-Gal-Gal-Xyl-Proteins]][c] '''=>''' 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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** esiliculosus_genome
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* With common name(s):
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***go-term
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** 1 UDP-N-acetyl-α-D-glucosamine[c] '''+''' 1 β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein][c] '''=>''' 1 α-N-acetyl-D-glucosaminyl-(1->4)-β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein][c] '''+''' 1 H+[c] '''+''' 1 UDP[c]
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* [[RXN-12579]]
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** esiliculosus_genome
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== Genes associated with this reaction  ==
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***go-term
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Genes have been associated with this reaction based on different elements listed below.
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* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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* [[Ec-14_003840]]
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** esiliculosus_genome
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** ESILICULOSUS_GENOME
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***go-term
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***GO-TERM
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== Pathways associated ==
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* [[Ec-02_004080]]
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* [[LIPAS-PWY]]
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** ESILICULOSUS_GENOME
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* [[PWY-6857]]
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***GO-TERM
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* [[Ec-23_000390]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-15_002870]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_005460]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-23_003230]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-08_002720]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1270249}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07397 R07397]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1279057}}
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{{#set: common name=acetylglucosaminyltransferase}}
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{{#set: centisome position=20.195835    }}
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{{#set: ec number=EC-2.4.1.223}}
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{{#set: common name=Esi_0119_0024|Esi0119_0024}}
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{{#set: gene associated=Ec-14_003840|Ec-02_004080|Ec-23_000390|Ec-15_002870|Ec-14_005460|Ec-23_003230|Ec-08_002720}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: in pathway=PWY-6558}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:33, 17 March 2018

Gene Ec-11_001230

  • left end position:
    • 1270249
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1279057
  • centisome position:
    • 20.195835
  • Synonym(s):
    • Esi_0119_0024
    • Esi0119_0024

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7383&oldid=9389"