Difference between revisions of "IPPISOM-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-168 RXN1F-168] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-5DP-3DP GUANOSINE-5DP-3DP] == * smiles: ** C(OP(=O)([O-])OP(=O)(O)[O-])C1(OC(C(O)C(OP...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-168 RXN1F-168] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-5DP-3DP GUANOSINE-5DP-3DP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP(=O)([O-])OP(=O)(O)[O-])C1(OC(C(O)C(OP(=O)([O-])OP(=O)([O-])[O-])1)N3(C=NC2(C(=O)NC(N)=NC=23)))
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/1.14.11.12 EC-1.14.11.12]
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** InChIKey=BUFLLCUFNHESEH-UUOKFMHZSA-I
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* common name:
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** ppGpp
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* molecular weight:
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** 598.123   
 
* Synonym(s):
 
* Synonym(s):
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** guanosine tetraphosphate
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** guanosine 5'-diphosphate,3'-diphosphate
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** guanosine 3',5'-bispyrophosphate
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** guanosine 3',5'-bis(diphosphate)
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** guanosine 3'-diphosphate 5'-diphosphate
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** magic spot
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** guanosine-5',3'-tetraphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-10332]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CPD1F-96]][c]
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* [[GDPPYPHOSKIN-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 gibberellin44 (open lactone form)[c] '''=>''' 1 H2O[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c] '''+''' 1 gibberellin A19[c]
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−
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-19_002750]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-19_002760]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-08_003510]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-5035]], gibberellin biosynthesis III (early C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* DRUGBANK : DB04022
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16033 16033]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=15938967 15938967]
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** [http://www.genome.jp/dbget-bin/www_bget?R07184 R07184]
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* HMDB : HMDB59638
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: ec number=EC-1.14.11.12}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01228 C01228]
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{{#set: gene associated=Ec-19_002750|Ec-19_002760|Ec-08_003510}}
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* CHEMSPIDER:
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{{#set: in pathway=PWY-5035}}
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** [http://www.chemspider.com/Chemical-Structure.13082026.html 13082026]
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{{#set: reconstruction category=orthology}}
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* CHEBI:
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{{#set: reconstruction tool=pantograph}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=77828 77828]
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{{#set: reconstruction source=aragem}}
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* BIGG : 37137
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{{#set: smiles=C(OP(=O)([O-])OP(=O)(O)[O-])C1(OC(C(O)C(OP(=O)([O-])OP(=O)([O-])[O-])1)N3(C=NC2(C(=O)NC(N)=NC=23)))}}
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{{#set: inchi key=InChIKey=BUFLLCUFNHESEH-UUOKFMHZSA-I}}
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{{#set: common name=ppGpp}}
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{{#set: molecular weight=598.123    }}
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{{#set: common name=guanosine tetraphosphate|guanosine 5'-diphosphate,3'-diphosphate|guanosine 3',5'-bispyrophosphate|guanosine 3',5'-bis(diphosphate)|guanosine 3'-diphosphate 5'-diphosphate|magic spot|guanosine-5',3'-tetraphosphate}}
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{{#set: produced by=GDPPYPHOSKIN-RXN}}

Revision as of 21:41, 17 March 2018

Metabolite GUANOSINE-5DP-3DP

  • smiles:
    • C(OP(=O)([O-])OP(=O)(O)[O-])C1(OC(C(O)C(OP(=O)([O-])OP(=O)([O-])[O-])1)N3(C=NC2(C(=O)NC(N)=NC=23)))
  • inchi key:
    • InChIKey=BUFLLCUFNHESEH-UUOKFMHZSA-I
  • common name:
    • ppGpp
  • molecular weight:
    • 598.123
  • Synonym(s):
    • guanosine tetraphosphate
    • guanosine 5'-diphosphate,3'-diphosphate
    • guanosine 3',5'-bispyrophosphate
    • guanosine 3',5'-bis(diphosphate)
    • guanosine 3'-diphosphate 5'-diphosphate
    • magic spot
    • guanosine-5',3'-tetraphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(OP(=O)([O-])OP(=O)(O)[O-])C1(OC(C(O)C(OP(=O)([O-])OP(=O)([O-])[O-])1)N3(C=NC2(C(=O)NC(N)=NC=23)))" cannot be used as a page name in this wiki.



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